Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:108035590-108138011

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm36498	3	108030832 to 108036961	6129	-	lncRNA gene	predicted gene, 36498
Gstm4	3	108040408 to 108044894	4486	-	protein coding gene	glutathione S-transferase, mu 4
Tssr35119	3	108044685 to 108044738	53	-	TSS region	transcription start site region 35119
Cpgi13686	3	108044687 to 108045057	370		CpG island	CpG island 13686
Tssr35120	3	108044801 to 108044882	81	-	TSS region	transcription start site region 35120
Ampd2	3	108074062 to 108086651	12589	-	protein coding gene	adenosine monophosphate deaminase 2
Tssr35121	3	108081142 to 108081144	2	-	TSS region	transcription start site region 35121
Tssr35122	3	108082392 to 108082424	32	-	TSS region	transcription start site region 35122
Cpgi13687	3	108085117 to 108085523	406		CpG island	CpG island 13687
Tssr35123	3	108085346 to 108085412	66	-	TSS region	transcription start site region 35123
Tssr35124	3	108085422 to 108085438	16	-	TSS region	transcription start site region 35124
Gm12500	3	108085590 to 108088011	2421	+	antisense lncRNA gene	predicted gene 12500
Tssr31230	3	108086029 to 108086055	26	+	TSS region	transcription start site region 31230
Cpgi13688	3	108086236 to 108086818	582		CpG island	CpG island 13688
Tssr35125	3	108086590 to 108086707	117	-	TSS region	transcription start site region 35125
Etohcta4	3	108092789 to 108101432	8643		QTL	ethanol conditioned taste aversion 4
Gnat2	3	108092789 to 108101432	8643	+	protein coding gene	guanine nucleotide binding protein, alpha transducing 2
Tssr31231	3	108092851 to 108092858	7	+	TSS region	transcription start site region 31231
Tssr31232	3	108093052 to 108093062	10	+	TSS region	transcription start site region 31232
Tssr31233	3	108093109 to 108093120	11	+	TSS region	transcription start site region 31233
Gnai3	3	108107280 to 108146146	38866	-	protein coding gene	guanine nucleotide binding protein (G protein), alpha inhibiting 3
Tssr35126	3	108121180 to 108121189	9	-	TSS region	transcription start site region 35126
Tssr35127	3	108134688 to 108134692	4	-	TSS region	transcription start site region 35127
Cpgi13689	3	108134873 to 108135025	152		CpG island	CpG island 13689