Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:107972843-108062862

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr31229 3 107979600 to 107979613 13 + TSS region transcription start site region 31229
Gm12497 3 107979632 to 107979868 236 + pseudogene predicted pseudogene 12497
Gstm2 3 107981702 to 107986436 4734 - protein coding gene glutathione S-transferase, mu 2
Tssr35105 3 107984629 to 107984640 11 - TSS region transcription start site region 35105
Tssr35106 3 107986397 to 107986399 2 - TSS region transcription start site region 35106
Tssr35107 3 107986408 to 107986466 58 - TSS region transcription start site region 35107
Gm43746 3 107999443 to 107999845 402 - pseudogene predicted gene 43746
Gstm1 3 108012255 to 108017973 5718 - protein coding gene glutathione S-transferase, mu 1
Tssr35108 3 108012447 to 108012462 15 - TSS region transcription start site region 35108
Tssr35109 3 108012559 to 108012572 13 - TSS region transcription start site region 35109
Tssr35110 3 108012670 to 108012709 39 - TSS region transcription start site region 35110
Tssr35111 3 108012735 to 108012776 41 - TSS region transcription start site region 35111
Cpgi13685 3 108017419 to 108018207 788 CpG island CpG island 13685
Tssr35112 3 108017431 to 108017441 10 - TSS region transcription start site region 35112
Tssr35113 3 108017442 to 108017458 16 - TSS region transcription start site region 35113
Tssr35114 3 108017460 to 108017470 10 - TSS region transcription start site region 35114
Tssr35115 3 108017655 to 108017662 7 - TSS region transcription start site region 35115
Tssr35116 3 108017811 to 108017826 15 - TSS region transcription start site region 35116
Tssr35117 3 108017843 to 108017862 19 - TSS region transcription start site region 35117
Tssr35118 3 108017877 to 108017884 7 - TSS region transcription start site region 35118
Gm12502 3 108019885 to 108020328 443 + pseudogene predicted gene 12502
Gm12498 3 108020417 to 108025943 5526 - lincRNA gene predicted gene 12498
D3Mit285 3 108024847 to 108024956 109 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 285
Gm12499 3 108029600 to 108031361 1761 - pseudogene predicted gene 12499
Gm36498 3 108030832 to 108036961 6129 - lncRNA gene predicted gene, 36498
Gm25592 3 108034026 to 108034156 130 + snoRNA gene predicted gene, 25592
Gstm4 3 108040408 to 108044894 4486 - protein coding gene glutathione S-transferase, mu 4
Tssr35119 3 108044685 to 108044738 53 - TSS region transcription start site region 35119
Cpgi13686 3 108044687 to 108045057 370 CpG island CpG island 13686
Tssr35120 3 108044801 to 108044882 81 - TSS region transcription start site region 35120