Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Gm40120 | 3 | 1750 | + | lncRNA gene | predicted gene, 40120 | |
Gm24383 | 3 | 332 | - | unclassified non-coding RNA gene | predicted gene, 24383 | |
Kcnc4 | 3 | 20627 | - | protein coding gene | potassium voltage gated channel, Shaw-related subfamily, member 4 | |
A330043J11Rik | 3 | 2635 | unclassified gene | RIKEN cDNA A330043J11 gene | ||
Cpgi13675 | 3 | 2787 | CpG island | CpG island 13675 | ||
Tssr35061 | 3 | 25 | - | TSS region | transcription start site region 35061 | |
Tssr35062 | 3 | 53 | - | TSS region | transcription start site region 35062 | |
Tssr35063 | 3 | 25 | - | TSS region | transcription start site region 35063 | |
Tssr35064 | 3 | 76 | - | TSS region | transcription start site region 35064 | |
Tssr31210 | 3 | 2 | + | TSS region | transcription start site region 31210 | |
Slc6a17 | 3 | 50470 | - | protein coding gene | solute carrier family 6 (neurotransmitter transporter), member 17 | |
Orgwq5 | 3 | 40129433 | QTL | organ weight QTL 5 | ||
Sle22 | 3 | 136 | QTL | systematic lupus erythematosus susceptibility 22 | ||
msrvh1 | 3 | 8360928 | QTL | modifier of susceptibility to renal vascular hypertrophy/hyperplasia 1 | ||
Cia5c | 3 | 18052968 | QTL | collagen induced arthritis QTL 5c | ||
D3Mit103 | 3 | 136 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 103 | ||
Cpgi13676 | 3 | 1788 | CpG island | CpG island 13676 | ||
Tssr35065 | 3 | 53 | - | TSS region | transcription start site region 35065 | |
Tssr35066 | 3 | 23 | - | TSS region | transcription start site region 35066 | |
Tssr35067 | 3 | 75 | - | TSS region | transcription start site region 35067 | |
Tssr35068 | 3 | 22 | - | TSS region | transcription start site region 35068 | |
Gm36097 | 3 | 6260 | + | lncRNA gene | predicted gene, 36097 | |
Ubl4b | 3 | 1375 | - | protein coding gene | ubiquitin-like 4B | |
Tssr35069 | 3 | 52 | - | TSS region | transcription start site region 35069 | |
Tssr35070 | 3 | 14 | - | TSS region | transcription start site region 35070 | |
Tssr35071 | 3 | 10 | - | TSS region | transcription start site region 35071 | |
Cpgi13677 | 3 | 888 | CpG island | CpG island 13677 | ||
Cpgi13678 | 3 | 2408 | CpG island | CpG island 13678 | ||
Alx3 | 3 | 10745 | + | protein coding gene | aristaless-like homeobox 3 | |
Tssr31211 | 3 | 26 | + | TSS region | transcription start site region 31211 | |
Tssr31212 | 3 | 8 | + | TSS region | transcription start site region 31212 | |
Strip1 | 3 | 19162 | - | protein coding gene | striatin interacting protein 1 | |
Cpgi13679 | 3 | 1124 | CpG island | CpG island 13679 | ||
Gm10961 | 3 | 1768 | + | unclassified gene | predicted gene 10961 | |
Tssr35072 | 3 | 24 | - | TSS region | transcription start site region 35072 | |
Ahcyl1 | 3 | 33428 | - | protein coding gene | S-adenosylhomocysteine hydrolase-like 1 | |
Tssr35073 | 3 | 28 | - | TSS region | transcription start site region 35073 | |
Tssr35074 | 3 | 45 | - | TSS region | transcription start site region 35074 | |
Tssr35075 | 3 | 8 | - | TSS region | transcription start site region 35075 | |
Tssr35076 | 3 | 4 | - | TSS region | transcription start site region 35076 | |
Tssr35077 | 3 | 24 | - | TSS region | transcription start site region 35077 | |
Cpgi13680 | 3 | 1153 | CpG island | CpG island 13680 | ||
Tssr35078 | 3 | 11 | - | TSS region | transcription start site region 35078 | |
Tssr1013 | 3 | 11 | - | TSS region | transcription start site region 1013 | |
Tssr35079 | 3 | 3 | - | TSS region | transcription start site region 35079 | |
Tssr35080 | 3 | 112 | - | TSS region | transcription start site region 35080 | |
Gm40121 | 3 | 116293 | + | lncRNA gene | predicted gene, 40121 | |
Csf1 | 3 | 19421 | - | protein coding gene | colony stimulating factor 1 (macrophage) | |
Tssr35081 | 3 | 30 | - | TSS region | transcription start site region 35081 | |
Tssr35082 | 3 | 37 | - | TSS region | transcription start site region 35082 | |
Tssr35083 | 3 | 22 | - | TSS region | transcription start site region 35083 | |
Tssr31213 | 3 | 21 | + | TSS region | transcription start site region 31213 | |
Tssr35084 | 3 | 28 | - | TSS region | transcription start site region 35084 | |
D3Mit104.3 | 3 | 109 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 104.3 | ||
D3Mit104 | 3 | 92 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 104 | ||
D3Mit104.2 | 3 | 156 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 104.2 | ||
Cpgi13681 | 3 | 827 | CpG island | CpG island 13681 | ||
Tssr1014 | 3 | 10 | - | TSS region | transcription start site region 1014 | |
Tssr35085 | 3 | 40 | - | TSS region | transcription start site region 35085 | |
Tssr35086 | 3 | 15 | - | TSS region | transcription start site region 35086 | |
Tssr1015 | 3 | 24 | - | TSS region | transcription start site region 1015 | |
D3Mit104.1 | 3 | 243 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 104.1 | ||
Gm43233 | 3 | 615 | + | pseudogene | predicted gene 43233 | |
Tssr35087 | 3 | 4 | - | TSS region | transcription start site region 35087 | |
Gm36211 | 3 | 13318 | - | lincRNA gene | predicted gene, 36211 | |
Tssr35088 | 3 | 15 | - | TSS region | transcription start site region 35088 | |
Tssr35089 | 3 | 11 | - | TSS region | transcription start site region 35089 | |
Tssr1016 | 3 | 8 | - | TSS region | transcription start site region 1016 | |
Tssr1017 | 3 | 9 | - | TSS region | transcription start site region 1017 | |
Tssr31214 | 3 | 11 | + | TSS region | transcription start site region 31214 | |
Gm5075 | 3 | 621 | - | pseudogene | predicted gene 5075 | |
Cpgi13682 | 3 | 392 | CpG island | CpG island 13682 | ||
Cpgi13683 | 3 | 213 | CpG island | CpG island 13683 | ||
Tssr31215 | 3 | 35 | + | TSS region | transcription start site region 31215 | |
Tssr31216 | 3 | 7 | + | TSS region | transcription start site region 31216 | |
Tssr31217 | 3 | 6 | + | TSS region | transcription start site region 31217 | |
Tssr31218 | 3 | 2 | + | TSS region | transcription start site region 31218 | |
4930554G22Rik | 3 | 685 | + | unclassified gene | RIKEN cDNA 4930554G22 gene | |
Tssr31219 | 3 | 18 | + | TSS region | transcription start site region 31219 | |
Tssr31220 | 3 | 25 | + | TSS region | transcription start site region 31220 | |
Eps8l3 | 3 | 15671 | + | protein coding gene | EPS8-like 3 | |
Tssr31221 | 3 | 25 | + | TSS region | transcription start site region 31221 | |
Tssr31222 | 3 | 5 | + | TSS region | transcription start site region 31222 | |
Gm43745 | 3 | 1882 | + | unclassified gene | predicted gene 43745 | |
4933431E20Rik | 3 | 7363 | - | antisense lncRNA gene | RIKEN cDNA 4933431E20 gene | |
Cpgi13684 | 3 | 723 | CpG island | CpG island 13684 | ||
Tssr35090 | 3 | 7 | - | TSS region | transcription start site region 35090 | |
Tssr35091 | 3 | 51 | - | TSS region | transcription start site region 35091 | |
Tssr35092 | 3 | 11 | - | TSS region | transcription start site region 35092 | |
Tssr31223 | 3 | 13 | + | TSS region | transcription start site region 31223 | |
Tssr31224 | 3 | 52 | + | TSS region | transcription start site region 31224 | |
Gstm5 | 3 | 2831 | + | protein coding gene | glutathione S-transferase, mu 5 | |
Tssr31225 | 3 | 1 | + | TSS region | transcription start site region 31225 | |
Tssr31226 | 3 | 15 | + | TSS region | transcription start site region 31226 | |
Tssr31227 | 3 | 49 | + | TSS region | transcription start site region 31227 | |
Tssr31228 | 3 | 30 | + | TSS region | transcription start site region 31228 | |
Gm9515 | 3 | 2524 | - | pseudogene | predicted gene 9515 | |
Tssr35093 | 3 | 22 | - | TSS region | transcription start site region 35093 | |
Gm12489 | 3 | 147 | + | pseudogene | predicted gene 12489 | |
Gstm7 | 3 | 5483 | - | protein coding gene | glutathione S-transferase, mu 7 | |
Tssr35094 | 3 | 9 | - | TSS region | transcription start site region 35094 | |
Tssr35095 | 3 | 85 | - | TSS region | transcription start site region 35095 | |
Tssr35096 | 3 | 16 | - | TSS region | transcription start site region 35096 | |
Tssr35097 | 3 | 25 | - | TSS region | transcription start site region 35097 | |
Gstm6 | 3 | 4902 | - | protein coding gene | glutathione S-transferase, mu 6 | |
Tssr35098 | 3 | 16 | - | TSS region | transcription start site region 35098 | |
Tssr35099 | 3 | 11 | - | TSS region | transcription start site region 35099 | |
Tssr35100 | 3 | 16 | - | TSS region | transcription start site region 35100 | |
Tssr35101 | 3 | 31 | - | TSS region | transcription start site region 35101 | |
Tssr35102 | 3 | 16 | - | TSS region | transcription start site region 35102 | |
Tssr35103 | 3 | 36 | - | TSS region | transcription start site region 35103 | |
Gm12494 | 3 | 2326 | - | pseudogene | predicted gene 12494 | |
Gstm3 | 3 | 5478 | - | protein coding gene | glutathione S-transferase, mu 3 | |
Tssr35104 | 3 | 15 | - | TSS region | transcription start site region 35104 | |
Tssr31229 | 3 | 13 | + | TSS region | transcription start site region 31229 | |
Gm12497 | 3 | 236 | + | pseudogene | predicted pseudogene 12497 | |
Gstm2 | 3 | 4734 | - | protein coding gene | glutathione S-transferase, mu 2 | |
Tssr35105 | 3 | 11 | - | TSS region | transcription start site region 35105 | |
Tssr35106 | 3 | 2 | - | TSS region | transcription start site region 35106 | |
Tssr35107 | 3 | 58 | - | TSS region | transcription start site region 35107 | |
Gm43746 | 3 | 402 | - | pseudogene | predicted gene 43746 | |
Gstm1 | 3 | 5718 | - | protein coding gene | glutathione S-transferase, mu 1 | |
Tssr35108 | 3 | 15 | - | TSS region | transcription start site region 35108 | |
Tssr35109 | 3 | 13 | - | TSS region | transcription start site region 35109 | |
Tssr35110 | 3 | 39 | - | TSS region | transcription start site region 35110 | |
Tssr35111 | 3 | 41 | - | TSS region | transcription start site region 35111 | |
Cpgi13685 | 3 | 788 | CpG island | CpG island 13685 | ||
Tssr35112 | 3 | 10 | - | TSS region | transcription start site region 35112 | |
Tssr35113 | 3 | 16 | - | TSS region | transcription start site region 35113 | |
Tssr35114 | 3 | 10 | - | TSS region | transcription start site region 35114 | |
Tssr35115 | 3 | 7 | - | TSS region | transcription start site region 35115 | |
Tssr35116 | 3 | 15 | - | TSS region | transcription start site region 35116 | |
Tssr35117 | 3 | 19 | - | TSS region | transcription start site region 35117 | |
Tssr35118 | 3 | 7 | - | TSS region | transcription start site region 35118 | |
Gm12502 | 3 | 443 | + | pseudogene | predicted gene 12502 | |
Gm12498 | 3 | 5526 | - | lincRNA gene | predicted gene 12498 | |
D3Mit285 | 3 | 109 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 285 | ||
Gm12499 | 3 | 1761 | - | pseudogene | predicted gene 12499 | |
Gm36498 | 3 | 6129 | - | lncRNA gene | predicted gene, 36498 | |
Gm25592 | 3 | 130 | + | snoRNA gene | predicted gene, 25592 | |
Gstm4 | 3 | 4486 | - | protein coding gene | glutathione S-transferase, mu 4 | |
Tssr35119 | 3 | 53 | - | TSS region | transcription start site region 35119 | |
Cpgi13686 | 3 | 370 | CpG island | CpG island 13686 | ||
Tssr35120 | 3 | 81 | - | TSS region | transcription start site region 35120 | |
Ampd2 | 3 | 12589 | - | protein coding gene | adenosine monophosphate deaminase 2 | |
Tssr35121 | 3 | 2 | - | TSS region | transcription start site region 35121 | |
Tssr35122 | 3 | 32 | - | TSS region | transcription start site region 35122 | |
Cpgi13687 | 3 | 406 | CpG island | CpG island 13687 | ||
Tssr35123 | 3 | 66 | - | TSS region | transcription start site region 35123 | |
Tssr35124 | 3 | 16 | - | TSS region | transcription start site region 35124 | |
Gm12500 | 3 | 2421 | + | antisense lncRNA gene | predicted gene 12500 | |
Tssr31230 | 3 | 26 | + | TSS region | transcription start site region 31230 | |
Cpgi13688 | 3 | 582 | CpG island | CpG island 13688 | ||
Tssr35125 | 3 | 117 | - | TSS region | transcription start site region 35125 | |
Gnat2 | 3 | 8643 | + | protein coding gene | guanine nucleotide binding protein, alpha transducing 2 | |
Etohcta4 | 3 | 8643 | QTL | ethanol conditioned taste aversion 4 | ||
Tssr31231 | 3 | 7 | + | TSS region | transcription start site region 31231 | |
Tssr31232 | 3 | 10 | + | TSS region | transcription start site region 31232 | |
Tssr31233 | 3 | 11 | + | TSS region | transcription start site region 31233 | |
Gnai3 | 3 | 38866 | - | protein coding gene | guanine nucleotide binding protein (G protein), alpha inhibiting 3 | |
Tssr35126 | 3 | 9 | - | TSS region | transcription start site region 35126 | |
Tssr35127 | 3 | 4 | - | TSS region | transcription start site region 35127 | |
Cpgi13689 | 3 | 152 | CpG island | CpG island 13689 | ||
Cpgi13690 | 3 | 741 | CpG island | CpG island 13690 | ||
Tssr35128 | 3 | 70 | - | TSS region | transcription start site region 35128 | |
Tssr1018 | 3 | 21 | + | TSS region | transcription start site region 1018 | |
Tssr31234 | 3 | 23 | + | TSS region | transcription start site region 31234 | |
Gpr61 | 3 | 6561 | - | protein coding gene | G protein-coupled receptor 61 | |
Cpgi13691 | 3 | 458 | CpG island | CpG island 13691 | ||
Tssr35129 | 3 | 37 | - | TSS region | transcription start site region 35129 | |
Gm12524 | 3 | 19464 | + | lincRNA gene | predicted gene 12524 | |
Gm40122 | 3 | 2709 | - | lncRNA gene | predicted gene, 40122 | |
Cpgi13692 | 3 | 1311 | CpG island | CpG island 13692 | ||
Tssr31235 | 3 | 75 | + | TSS region | transcription start site region 31235 | |
Amigo1 | 3 | 5951 | + | protein coding gene | adhesion molecule with Ig like domain 1 | |
Tssr31236 | 3 | 14 | + | TSS region | transcription start site region 31236 | |
Cyb561d1 | 3 | 5525 | - | protein coding gene | cytochrome b-561 domain containing 1 | |
Tssr1019 | 3 | 10 | + | TSS region | transcription start site region 1019 | |
Tssr35130 | 3 | 30 | - | TSS region | transcription start site region 35130 | |
Cpgi13693 | 3 | 618 | CpG island | CpG island 13693 | ||
Tssr31237 | 3 | 30 | + | TSS region | transcription start site region 31237 | |
Tssr35131 | 3 | 51 | - | TSS region | transcription start site region 35131 | |
Atxn7l2 | 3 | 8305 | - | protein coding gene | ataxin 7-like 2 | |
Cpgi13694 | 3 | 1364 | CpG island | CpG island 13694 | ||
Tssr35132 | 3 | 64 | - | TSS region | transcription start site region 35132 | |
Sypl2 | 3 | 15176 | - | protein coding gene | synaptophysin-like 2 | |
Tssr35133 | 3 | 8 | - | TSS region | transcription start site region 35133 | |
Tssr35134 | 3 | 31 | - | TSS region | transcription start site region 35134 | |
Cpgi13695 | 3 | 1081 | CpG island | CpG island 13695 | ||
Tssr35135 | 3 | 16 | - | TSS region | transcription start site region 35135 | |
Tssr35136 | 3 | 85 | - | TSS region | transcription start site region 35136 | |
Gm40123 | 3 | 12662 | + | lincRNA gene | predicted gene, 40123 | |
Gm12501 | 3 | 528 | - | pseudogene | predicted gene 12501 | |
Cpgi13696 | 3 | 639 | CpG island | CpG island 13696 | ||
1700010K24Rik | 3 | 8076 | - | antisense lncRNA gene | RIKEN cDNA 1700010K24 gene | |
Cpgi13697 | 3 | 962 | CpG island | CpG island 13697 | ||
Tssr35137 | 3 | 37 | - | TSS region | transcription start site region 35137 | |
Psma5 | 3 | 23026 | + | protein coding gene | proteasome (prosome, macropain) subunit, alpha type 5 | |
Tssr35138 | 3 | 50 | - | TSS region | transcription start site region 35138 | |
Tssr1020 | 3 | 3 | + | TSS region | transcription start site region 1020 |