Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:107218993-107339012

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cym 3 107211295 to 107221732 10437 - protein coding gene chymosin
Tssr35045 3 107219009 to 107219056 47 - TSS region transcription start site region 35045
Tssr35046 3 107219214 to 107219235 21 - TSS region transcription start site region 35046
Tssr31188 3 107219625 to 107219631 6 + TSS region transcription start site region 31188
Tssr35047 3 107219651 to 107219686 35 - TSS region transcription start site region 35047
Tssr35048 3 107219701 to 107219741 40 - TSS region transcription start site region 35048
Tssr31189 3 107219707 to 107219730 23 + TSS region transcription start site region 31189
Tssr35049 3 107219748 to 107219760 12 - TSS region transcription start site region 35049
Tssr35050 3 107219769 to 107219775 6 - TSS region transcription start site region 35050
Tssr35051 3 107219780 to 107219785 5 - TSS region transcription start site region 35051
Tssr35052 3 107220409 to 107220414 5 - TSS region transcription start site region 35052
Tssr35053 3 107221722 to 107221738 16 - TSS region transcription start site region 35053
Tssr31190 3 107230456 to 107230467 11 + TSS region transcription start site region 31190
Tssr31191 3 107230608 to 107230617 9 + TSS region transcription start site region 31191
A630076J17Rik 3 107230614 to 107234031 3417 + protein coding gene RIKEN cDNA A630076J17 gene
D3Tem2 3 107231444 to 107231694 250 DNA segment DNA segment, Chr 3, Temple 2
Prok1 3 107232797 to 107239707 6910 - protein coding gene prokineticin 1
Tssr35054 3 107238657 to 107238707 50 - TSS region transcription start site region 35054
Tssr31192 3 107241789 to 107241799 10 + TSS region transcription start site region 31192
Tssr31193 3 107241860 to 107241880 20 + TSS region transcription start site region 31193
Tssr31194 3 107241915 to 107241918 3 + TSS region transcription start site region 31194
D3Tem1 3 107278067 to 107278139 72 DNA segment DNA segment, Chr 3, Temple 1
Tssr31195 3 107278800 to 107278808 8 + TSS region transcription start site region 31195
Tssr31196 3 107278820 to 107278829 9 + TSS region transcription start site region 31196
Tssr31197 3 107278844 to 107278864 20 + TSS region transcription start site region 31197
Cpgi13672 3 107278848 to 107279446 598 CpG island CpG island 13672
Lamtor5 3 107278858 to 107284082 5224 + protein coding gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 5
Tssr31198 3 107278869 to 107278892 23 + TSS region transcription start site region 31198
Tssr31199 3 107278993 to 107279012 19 + TSS region transcription start site region 31199
Tssr31200 3 107279014 to 107279025 11 + TSS region transcription start site region 31200
Tssr31201 3 107279028 to 107279058 30 + TSS region transcription start site region 31201
Tssr31202 3 107279066 to 107279071 5 + TSS region transcription start site region 31202
Tssr31203 3 107291215 to 107291280 65 + TSS region transcription start site region 31203
Slc16a4 3 107291230 to 107312115 20885 + protein coding gene solute carrier family 16 (monocarboxylic acid transporters), member 4
Tssr31204 3 107291285 to 107291301 16 + TSS region transcription start site region 31204
Tssr1012 3 107291302 to 107291304 2 + TSS region transcription start site region 1012
Tssr35055 3 107310366 to 107310370 4 - TSS region transcription start site region 35055
Rbm15 3 107325421 to 107333673 8252 - protein coding gene RNA binding motif protein 15
Tssr35056 3 107326574 to 107326578 4 - TSS region transcription start site region 35056
Tssr35057 3 107329905 to 107329945 40 - TSS region transcription start site region 35057
Cpgi13673 3 107331964 to 107334429 2465 CpG island CpG island 13673
Tssr35058 3 107333012 to 107333023 11 - TSS region transcription start site region 35058
Tssr35059 3 107333024 to 107333069 45 - TSS region transcription start site region 35059
Tssr31205 3 107333789 to 107333802 13 + TSS region transcription start site region 31205
Tssr35060 3 107333953 to 107333973 20 - TSS region transcription start site region 35060