Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
A930002I21Rik | 3 | 7521 | + | lincRNA gene | RIKEN cDNA A930002I21 gene | |
Cpgi13670 | 3 | 1953 | CpG island | CpG island 13670 | ||
Tssr31156 | 3 | 61 | + | TSS region | transcription start site region 31156 | |
Tssr31157 | 3 | 30 | + | TSS region | transcription start site region 31157 | |
Kcna2 | 3 | 13859 | + | protein coding gene | potassium voltage-gated channel, shaker-related subfamily, member 2 | |
Tssr31158 | 3 | 14 | + | TSS region | transcription start site region 31158 | |
Tssr31159 | 3 | 11 | + | TSS region | transcription start site region 31159 | |
Tssr31160 | 3 | 7 | + | TSS region | transcription start site region 31160 | |
Tssr31161 | 3 | 53 | + | TSS region | transcription start site region 31161 | |
Tssr31162 | 3 | 9 | + | TSS region | transcription start site region 31162 | |
Tssr31163 | 3 | 12 | + | TSS region | transcription start site region 31163 | |
Tssr31164 | 3 | 37 | + | TSS region | transcription start site region 31164 | |
Tssr31165 | 3 | 21 | + | TSS region | transcription start site region 31165 | |
Cpgi13671 | 3 | 207 | CpG island | CpG island 13671 | ||
Tssr1004 | 3 | 4 | + | TSS region | transcription start site region 1004 | |
Tssr31166 | 3 | 5 | + | TSS region | transcription start site region 31166 | |
Kcna10 | 3 | 12578 | + | protein coding gene | potassium voltage-gated channel, shaker-related subfamily, member 10 | |
Tssr31167 | 3 | 10 | + | TSS region | transcription start site region 31167 | |
Cym | 3 | 10437 | - | protein coding gene | chymosin | |
Tssr35013 | 3 | 9 | - | TSS region | transcription start site region 35013 | |
Tssr31168 | 3 | 36 | + | TSS region | transcription start site region 31168 | |
Tssr35014 | 3 | 41 | - | TSS region | transcription start site region 35014 | |
Tssr31169 | 3 | 23 | + | TSS region | transcription start site region 31169 | |
Tssr35015 | 3 | 3 | - | TSS region | transcription start site region 35015 | |
Tssr31170 | 3 | 13 | + | TSS region | transcription start site region 31170 | |
Tssr1005 | 3 | 7 | - | TSS region | transcription start site region 1005 | |
Tssr31171 | 3 | 3 | + | TSS region | transcription start site region 31171 | |
Tssr31172 | 3 | 8 | + | TSS region | transcription start site region 31172 | |
Tssr31173 | 3 | 11 | + | TSS region | transcription start site region 31173 | |
Tssr1006 | 3 | 5 | - | TSS region | transcription start site region 1006 | |
Tssr31174 | 3 | 28 | + | TSS region | transcription start site region 31174 | |
Tssr31175 | 3 | 15 | + | TSS region | transcription start site region 31175 | |
Tssr35016 | 3 | 11 | - | TSS region | transcription start site region 35016 | |
Tssr35017 | 3 | 9 | - | TSS region | transcription start site region 35017 | |
Tssr31176 | 3 | 8 | + | TSS region | transcription start site region 31176 | |
Tssr35018 | 3 | 11 | - | TSS region | transcription start site region 35018 | |
Tssr35019 | 3 | 4 | - | TSS region | transcription start site region 35019 | |
Tssr35020 | 3 | 15 | - | TSS region | transcription start site region 35020 | |
Tssr31177 | 3 | 26 | + | TSS region | transcription start site region 31177 | |
Tssr35021 | 3 | 9 | - | TSS region | transcription start site region 35021 | |
Tssr1007 | 3 | 4 | - | TSS region | transcription start site region 1007 | |
Tssr35022 | 3 | 15 | - | TSS region | transcription start site region 35022 | |
Tssr35023 | 3 | 7 | - | TSS region | transcription start site region 35023 | |
Tssr35024 | 3 | 5 | - | TSS region | transcription start site region 35024 | |
Tssr35025 | 3 | 4 | - | TSS region | transcription start site region 35025 | |
Tssr35026 | 3 | 32 | - | TSS region | transcription start site region 35026 | |
Tssr35027 | 3 | 5 | - | TSS region | transcription start site region 35027 | |
Tssr35028 | 3 | 31 | - | TSS region | transcription start site region 35028 | |
Tssr35029 | 3 | 38 | - | TSS region | transcription start site region 35029 | |
Tssr35030 | 3 | 6 | - | TSS region | transcription start site region 35030 | |
Tssr31178 | 3 | 21 | + | TSS region | transcription start site region 31178 | |
Tssr35031 | 3 | 5 | - | TSS region | transcription start site region 35031 | |
Tssr35032 | 3 | 13 | - | TSS region | transcription start site region 35032 | |
Tssr35033 | 3 | 12 | - | TSS region | transcription start site region 35033 | |
Tssr31179 | 3 | 12 | + | TSS region | transcription start site region 31179 | |
Tssr35034 | 3 | 54 | - | TSS region | transcription start site region 35034 | |
Tssr31180 | 3 | 9 | + | TSS region | transcription start site region 31180 | |
Tssr1008 | 3 | 9 | + | TSS region | transcription start site region 1008 | |
Tssr35035 | 3 | 25 | - | TSS region | transcription start site region 35035 | |
Tssr31181 | 3 | 15 | + | TSS region | transcription start site region 31181 | |
Tssr35036 | 3 | 13 | - | TSS region | transcription start site region 35036 | |
Tssr35037 | 3 | 29 | - | TSS region | transcription start site region 35037 | |
Tssr1009 | 3 | 4 | - | TSS region | transcription start site region 1009 | |
Tssr31182 | 3 | 6 | + | TSS region | transcription start site region 31182 | |
Tssr35038 | 3 | 8 | - | TSS region | transcription start site region 35038 | |
Tssr31183 | 3 | 5 | + | TSS region | transcription start site region 31183 | |
Tssr1010 | 3 | 7 | - | TSS region | transcription start site region 1010 | |
Tssr35039 | 3 | 8 | - | TSS region | transcription start site region 35039 | |
Tssr31184 | 3 | 49 | + | TSS region | transcription start site region 31184 | |
Tssr35040 | 3 | 2 | - | TSS region | transcription start site region 35040 | |
Tssr35041 | 3 | 8 | - | TSS region | transcription start site region 35041 | |
Tssr35042 | 3 | 30 | - | TSS region | transcription start site region 35042 | |
Tssr31185 | 3 | 33 | + | TSS region | transcription start site region 31185 | |
Tssr35043 | 3 | 101 | - | TSS region | transcription start site region 35043 | |
Tssr1011 | 3 | 8 | + | TSS region | transcription start site region 1011 | |
Tssr31186 | 3 | 9 | + | TSS region | transcription start site region 31186 | |
Tssr31187 | 3 | 5 | + | TSS region | transcription start site region 31187 | |
Tssr35044 | 3 | 5 | - | TSS region | transcription start site region 35044 | |
Tssr35045 | 3 | 47 | - | TSS region | transcription start site region 35045 | |
Tssr35046 | 3 | 21 | - | TSS region | transcription start site region 35046 | |
Tssr31188 | 3 | 6 | + | TSS region | transcription start site region 31188 | |
Tssr35047 | 3 | 35 | - | TSS region | transcription start site region 35047 | |
Tssr35048 | 3 | 40 | - | TSS region | transcription start site region 35048 | |
Tssr31189 | 3 | 23 | + | TSS region | transcription start site region 31189 | |
Tssr35049 | 3 | 12 | - | TSS region | transcription start site region 35049 | |
Tssr35050 | 3 | 6 | - | TSS region | transcription start site region 35050 | |
Tssr35051 | 3 | 5 | - | TSS region | transcription start site region 35051 | |
Tssr35052 | 3 | 5 | - | TSS region | transcription start site region 35052 | |
Tssr35053 | 3 | 16 | - | TSS region | transcription start site region 35053 | |
Tssr31190 | 3 | 11 | + | TSS region | transcription start site region 31190 | |
Tssr31191 | 3 | 9 | + | TSS region | transcription start site region 31191 | |
A630076J17Rik | 3 | 3417 | + | protein coding gene | RIKEN cDNA A630076J17 gene | |
D3Tem2 | 3 | 250 | DNA segment | DNA segment, Chr 3, Temple 2 | ||
Prok1 | 3 | 6910 | - | protein coding gene | prokineticin 1 | |
Tssr35054 | 3 | 50 | - | TSS region | transcription start site region 35054 | |
Tssr31192 | 3 | 10 | + | TSS region | transcription start site region 31192 | |
Tssr31193 | 3 | 20 | + | TSS region | transcription start site region 31193 | |
Tssr31194 | 3 | 3 | + | TSS region | transcription start site region 31194 | |
D3Tem1 | 3 | 72 | DNA segment | DNA segment, Chr 3, Temple 1 | ||
Tssr31195 | 3 | 8 | + | TSS region | transcription start site region 31195 | |
Tssr31196 | 3 | 9 | + | TSS region | transcription start site region 31196 | |
Tssr31197 | 3 | 20 | + | TSS region | transcription start site region 31197 | |
Cpgi13672 | 3 | 598 | CpG island | CpG island 13672 | ||
Lamtor5 | 3 | 5224 | + | protein coding gene | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 | |
Tssr31198 | 3 | 23 | + | TSS region | transcription start site region 31198 | |
Tssr31199 | 3 | 19 | + | TSS region | transcription start site region 31199 | |
Tssr31200 | 3 | 11 | + | TSS region | transcription start site region 31200 | |
Tssr31201 | 3 | 30 | + | TSS region | transcription start site region 31201 | |
Tssr31202 | 3 | 5 | + | TSS region | transcription start site region 31202 | |
Tssr31203 | 3 | 65 | + | TSS region | transcription start site region 31203 | |
Slc16a4 | 3 | 20885 | + | protein coding gene | solute carrier family 16 (monocarboxylic acid transporters), member 4 | |
Tssr31204 | 3 | 16 | + | TSS region | transcription start site region 31204 | |
Tssr1012 | 3 | 2 | + | TSS region | transcription start site region 1012 | |
Tssr35055 | 3 | 4 | - | TSS region | transcription start site region 35055 | |
Rbm15 | 3 | 8252 | - | protein coding gene | RNA binding motif protein 15 | |
Tssr35056 | 3 | 4 | - | TSS region | transcription start site region 35056 | |
Tssr35057 | 3 | 40 | - | TSS region | transcription start site region 35057 | |
Cpgi13673 | 3 | 2465 | CpG island | CpG island 13673 | ||
Tssr35058 | 3 | 11 | - | TSS region | transcription start site region 35058 | |
Tssr35059 | 3 | 45 | - | TSS region | transcription start site region 35059 | |
Tssr31205 | 3 | 13 | + | TSS region | transcription start site region 31205 | |
Tssr35060 | 3 | 20 | - | TSS region | transcription start site region 35060 | |
Cpgi13674 | 3 | 390 | CpG island | CpG island 13674 | ||
Tssr31206 | 3 | 5 | + | TSS region | transcription start site region 31206 | |
Gm5279 | 3 | 710 | + | pseudogene | predicted gene 5279 | |
Gm35700 | 3 | 8279 | + | lncRNA gene | predicted gene, 35700 | |
Tssr31207 | 3 | 7 | + | TSS region | transcription start site region 31207 | |
Tssr31208 | 3 | 5 | + | TSS region | transcription start site region 31208 | |
Tssr31209 | 3 | 10 | + | TSS region | transcription start site region 31209 | |
Gm40120 | 3 | 1750 | + | lncRNA gene | predicted gene, 40120 | |
Gm24383 | 3 | 332 | - | unclassified non-coding RNA gene | predicted gene, 24383 | |
Kcnc4 | 3 | 20627 | - | protein coding gene | potassium voltage gated channel, Shaw-related subfamily, member 4 | |
A330043J11Rik | 3 | 2635 | unclassified gene | RIKEN cDNA A330043J11 gene | ||
Cpgi13675 | 3 | 2787 | CpG island | CpG island 13675 | ||
Tssr35061 | 3 | 25 | - | TSS region | transcription start site region 35061 | |
Tssr35062 | 3 | 53 | - | TSS region | transcription start site region 35062 | |
Tssr35063 | 3 | 25 | - | TSS region | transcription start site region 35063 | |
Tssr35064 | 3 | 76 | - | TSS region | transcription start site region 35064 | |
Tssr31210 | 3 | 2 | + | TSS region | transcription start site region 31210 | |
Slc6a17 | 3 | 50470 | - | protein coding gene | solute carrier family 6 (neurotransmitter transporter), member 17 | |
msrvh1 | 3 | 8360928 | QTL | modifier of susceptibility to renal vascular hypertrophy/hyperplasia 1 | ||
Sle22 | 3 | 136 | QTL | systematic lupus erythematosus susceptibility 22 | ||
Orgwq5 | 3 | 40129433 | QTL | organ weight QTL 5 | ||
D3Mit103 | 3 | 136 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 103 | ||
Cia5c | 3 | 18052968 | QTL | collagen induced arthritis QTL 5c | ||
Cpgi13676 | 3 | 1788 | CpG island | CpG island 13676 | ||
Tssr35065 | 3 | 53 | - | TSS region | transcription start site region 35065 | |
Tssr35066 | 3 | 23 | - | TSS region | transcription start site region 35066 | |
Tssr35067 | 3 | 75 | - | TSS region | transcription start site region 35067 | |
Tssr35068 | 3 | 22 | - | TSS region | transcription start site region 35068 | |
Gm36097 | 3 | 6260 | + | lncRNA gene | predicted gene, 36097 | |
Ubl4b | 3 | 1375 | - | protein coding gene | ubiquitin-like 4B | |
Tssr35069 | 3 | 52 | - | TSS region | transcription start site region 35069 | |
Tssr35070 | 3 | 14 | - | TSS region | transcription start site region 35070 | |
Tssr35071 | 3 | 10 | - | TSS region | transcription start site region 35071 | |
Cpgi13677 | 3 | 888 | CpG island | CpG island 13677 | ||
Cpgi13678 | 3 | 2408 | CpG island | CpG island 13678 | ||
Alx3 | 3 | 10745 | + | protein coding gene | aristaless-like homeobox 3 | |
Tssr31211 | 3 | 26 | + | TSS region | transcription start site region 31211 | |
Tssr31212 | 3 | 8 | + | TSS region | transcription start site region 31212 | |
Strip1 | 3 | 19162 | - | protein coding gene | striatin interacting protein 1 | |
Cpgi13679 | 3 | 1124 | CpG island | CpG island 13679 | ||
Gm10961 | 3 | 1768 | + | unclassified gene | predicted gene 10961 | |
Tssr35072 | 3 | 24 | - | TSS region | transcription start site region 35072 | |
Ahcyl1 | 3 | 33428 | - | protein coding gene | S-adenosylhomocysteine hydrolase-like 1 | |
Tssr35073 | 3 | 28 | - | TSS region | transcription start site region 35073 | |
Tssr35074 | 3 | 45 | - | TSS region | transcription start site region 35074 | |
Tssr35075 | 3 | 8 | - | TSS region | transcription start site region 35075 | |
Tssr35076 | 3 | 4 | - | TSS region | transcription start site region 35076 | |
Tssr35077 | 3 | 24 | - | TSS region | transcription start site region 35077 | |
Cpgi13680 | 3 | 1153 | CpG island | CpG island 13680 | ||
Tssr35078 | 3 | 11 | - | TSS region | transcription start site region 35078 | |
Tssr1013 | 3 | 11 | - | TSS region | transcription start site region 1013 | |
Tssr35079 | 3 | 3 | - | TSS region | transcription start site region 35079 | |
Tssr35080 | 3 | 112 | - | TSS region | transcription start site region 35080 | |
Gm40121 | 3 | 116293 | + | lncRNA gene | predicted gene, 40121 | |
Csf1 | 3 | 19421 | - | protein coding gene | colony stimulating factor 1 (macrophage) | |
Tssr35081 | 3 | 30 | - | TSS region | transcription start site region 35081 | |
Tssr35082 | 3 | 37 | - | TSS region | transcription start site region 35082 | |
Tssr35083 | 3 | 22 | - | TSS region | transcription start site region 35083 | |
Tssr31213 | 3 | 21 | + | TSS region | transcription start site region 31213 | |
Tssr35084 | 3 | 28 | - | TSS region | transcription start site region 35084 | |
D3Mit104.3 | 3 | 109 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 104.3 | ||
D3Mit104 | 3 | 92 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 104 | ||
D3Mit104.2 | 3 | 156 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 104.2 | ||
Cpgi13681 | 3 | 827 | CpG island | CpG island 13681 | ||
Tssr1014 | 3 | 10 | - | TSS region | transcription start site region 1014 | |
Tssr35085 | 3 | 40 | - | TSS region | transcription start site region 35085 | |
Tssr35086 | 3 | 15 | - | TSS region | transcription start site region 35086 | |
Tssr1015 | 3 | 24 | - | TSS region | transcription start site region 1015 | |
D3Mit104.1 | 3 | 243 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 104.1 | ||
Gm43233 | 3 | 615 | + | pseudogene | predicted gene 43233 | |
Tssr35087 | 3 | 4 | - | TSS region | transcription start site region 35087 | |
Gm36211 | 3 | 13318 | - | lincRNA gene | predicted gene, 36211 | |
Tssr35088 | 3 | 15 | - | TSS region | transcription start site region 35088 | |
Tssr35089 | 3 | 11 | - | TSS region | transcription start site region 35089 | |
Tssr1016 | 3 | 8 | - | TSS region | transcription start site region 1016 | |
Tssr1017 | 3 | 9 | - | TSS region | transcription start site region 1017 | |
Tssr31214 | 3 | 11 | + | TSS region | transcription start site region 31214 | |
Gm5075 | 3 | 621 | - | pseudogene | predicted gene 5075 |