MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:105999664-106070065

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pifo	3	105996957 to 106014646	17689	-	protein coding gene	primary cilia formation
Cpgi13664	3	106001356 to 106001561	205		CpG island	CpG island 13664
Tssr34946	3	106001451 to 106001471	20	-	TSS region	transcription start site region 34946
Tssr34947	3	106001474 to 106001513	39	-	TSS region	transcription start site region 34947
Gm42722	3	106001561 to 106017539	15978	+	antisense lncRNA gene	predicted gene 42722
Tssr31101	3	106001578 to 106001621	43	+	TSS region	transcription start site region 31101
Gm42721	3	106007865 to 106009387	1522	-	sense intronic lncRNA gene	predicted gene 42721
Tssr34948	3	106014598 to 106014607	9	-	TSS region	transcription start site region 34948
Tssr34949	3	106014609 to 106014624	15	-	TSS region	transcription start site region 34949
Tssr34950	3	106014630 to 106014643	13	-	TSS region	transcription start site region 34950
Chil5	3	106016919 to 106032814	15895	-	protein coding gene	chitinase-like 5
Tssr34951	3	106032879 to 106032888	9	-	TSS region	transcription start site region 34951
Tssr34952	3	106032893 to 106032904	11	-	TSS region	transcription start site region 34952
Tssr34953	3	106032905 to 106032953	48	-	TSS region	transcription start site region 34953
Tssr31102	3	106034661 to 106034692	31	+	TSS region	transcription start site region 31102
Gm4540	3	106034664 to 106035065	401	+	pseudogene	predicted gene 4540
Tssr31103	3	106034778 to 106034818	40	+	TSS region	transcription start site region 31103
Gm9504	3	106042964 to 106043431	467	-	pseudogene	predicted gene 9504