Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:105994477-106444483

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pifo 3 105996957 to 106014646 17689 - protein coding gene primary cilia formation
Cpgi13664 3 106001356 to 106001561 205 CpG island CpG island 13664
Tssr34946 3 106001451 to 106001471 20 - TSS region transcription start site region 34946
Tssr34947 3 106001474 to 106001513 39 - TSS region transcription start site region 34947
Gm42722 3 106001561 to 106017539 15978 + antisense lncRNA gene predicted gene 42722
Tssr31101 3 106001578 to 106001621 43 + TSS region transcription start site region 31101
Gm42721 3 106007865 to 106009387 1522 - sense intronic lncRNA gene predicted gene 42721
Tssr34948 3 106014598 to 106014607 9 - TSS region transcription start site region 34948
Tssr34949 3 106014609 to 106014624 15 - TSS region transcription start site region 34949
Tssr34950 3 106014630 to 106014643 13 - TSS region transcription start site region 34950
Chil5 3 106016919 to 106032814 15895 - protein coding gene chitinase-like 5
Tssr34951 3 106032879 to 106032888 9 - TSS region transcription start site region 34951
Tssr34952 3 106032893 to 106032904 11 - TSS region transcription start site region 34952
Tssr34953 3 106032905 to 106032953 48 - TSS region transcription start site region 34953
Tssr31102 3 106034661 to 106034692 31 + TSS region transcription start site region 31102
Gm4540 3 106034664 to 106035065 401 + pseudogene predicted gene 4540
Tssr31103 3 106034778 to 106034818 40 + TSS region transcription start site region 31103
Gm9504 3 106042964 to 106043431 467 - pseudogene predicted gene 9504
Gm4248 3 106091034 to 106091349 315 + pseudogene predicted pseudogene 4248
Tssr31104 3 106113361 to 106113378 17 + TSS region transcription start site region 31104
Chia1 3 106113382 to 106132118 18736 + protein coding gene chitinase, acidic 1
Tssr998 3 106130920 to 106130923 3 + TSS region transcription start site region 998
Tssr31105 3 106131860 to 106131869 9 + TSS region transcription start site region 31105
Tssr31106 3 106131925 to 106131960 35 + TSS region transcription start site region 31106
Tssr31107 3 106131964 to 106132059 95 + TSS region transcription start site region 31107
Chil3 3 106147554 to 106167564 20010 - protein coding gene chitinase-like 3
Tssr31108 3 106147555 to 106147556 1 + TSS region transcription start site region 31108
Tssr34954 3 106149774 to 106149792 18 - TSS region transcription start site region 34954
Tssr34955 3 106163369 to 106163375 6 - TSS region transcription start site region 34955
Tssr34956 3 106166210 to 106166245 35 - TSS region transcription start site region 34956
Gm43709 3 106177832 to 106179175 1343 - pseudogene predicted gene 43709
Chil4 3 106201491 to 106219479 17988 - protein coding gene chitinase-like 4
Tssr34957 3 106219477 to 106219483 6 - TSS region transcription start site region 34957
Gm6522 3 106275744 to 106299027 23283 + pseudogene predicted gene 6522
Tssr999 3 106349646 to 106349648 2 - TSS region transcription start site region 999
Gm43212 3 106373206 to 106374307 1101 + pseudogene predicted gene 43212
Chil6 3 106387384 to 106406182 18798 - protein coding gene chitinase-like 6
Tssr34958 3 106406090 to 106406110 20 - TSS region transcription start site region 34958