Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:105962377-106012380

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wdr77 3 105959498 to 105969760 10262 + protein coding gene WD repeat domain 77
Gm42890 3 105959503 to 105984600 25097 + unclassified non-coding RNA gene predicted gene 42890
Tssr31094 3 105965077 to 105965105 28 + TSS region transcription start site region 31094
Tssr31095 3 105973790 to 105973809 19 + TSS region transcription start site region 31095
Ovgp1 3 105973802 to 105987423 13621 + protein coding gene oviductal glycoprotein 1
Tssr31096 3 105974974 to 105974977 3 + TSS region transcription start site region 31096
Tssr31097 3 105977786 to 105977791 5 + TSS region transcription start site region 31097
Tssr31098 3 105985083 to 105985098 15 + TSS region transcription start site region 31098
Tssr31099 3 105986155 to 105986162 7 + TSS region transcription start site region 31099
Tssr31100 3 105987377 to 105987380 3 + TSS region transcription start site region 31100
Pifo 3 105996957 to 106014646 17689 - protein coding gene primary cilia formation
Cpgi13664 3 106001356 to 106001561 205 CpG island CpG island 13664
Tssr34946 3 106001451 to 106001471 20 - TSS region transcription start site region 34946
Tssr34947 3 106001474 to 106001513 39 - TSS region transcription start site region 34947
Gm42722 3 106001561 to 106017539 15978 + antisense lncRNA gene predicted gene 42722
Tssr31101 3 106001578 to 106001621 43 + TSS region transcription start site region 31101
Gm42721 3 106007865 to 106009387 1522 - sense intronic lncRNA gene predicted gene 42721