Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:105954664-106115065

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp5f1 3 105942698 to 105960099 17401 - protein coding gene ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
Cpgi13663 3 105958775 to 105960067 1292 CpG island CpG island 13663
Tssr997 3 105959199 to 105959211 12 - TSS region transcription start site region 997
Tssr34944 3 105959212 to 105959237 25 - TSS region transcription start site region 34944
Tssr34945 3 105959252 to 105959280 28 - TSS region transcription start site region 34945
Tssr31092 3 105959410 to 105959427 17 + TSS region transcription start site region 31092
Tssr31093 3 105959453 to 105959541 88 + TSS region transcription start site region 31093
Wdr77 3 105959498 to 105969760 10262 + protein coding gene WD repeat domain 77
Gm42890 3 105959503 to 105984600 25097 + unclassified non-coding RNA gene predicted gene 42890
Tssr31094 3 105965077 to 105965105 28 + TSS region transcription start site region 31094
Tssr31095 3 105973790 to 105973809 19 + TSS region transcription start site region 31095
Ovgp1 3 105973802 to 105987423 13621 + protein coding gene oviductal glycoprotein 1
Tssr31096 3 105974974 to 105974977 3 + TSS region transcription start site region 31096
Tssr31097 3 105977786 to 105977791 5 + TSS region transcription start site region 31097
Tssr31098 3 105985083 to 105985098 15 + TSS region transcription start site region 31098
Tssr31099 3 105986155 to 105986162 7 + TSS region transcription start site region 31099
Tssr31100 3 105987377 to 105987380 3 + TSS region transcription start site region 31100
Pifo 3 105996957 to 106014646 17689 - protein coding gene primary cilia formation
Cpgi13664 3 106001356 to 106001561 205 CpG island CpG island 13664
Tssr34946 3 106001451 to 106001471 20 - TSS region transcription start site region 34946
Tssr34947 3 106001474 to 106001513 39 - TSS region transcription start site region 34947
Gm42722 3 106001561 to 106017539 15978 + antisense lncRNA gene predicted gene 42722
Tssr31101 3 106001578 to 106001621 43 + TSS region transcription start site region 31101
Gm42721 3 106007865 to 106009387 1522 - sense intronic lncRNA gene predicted gene 42721
Tssr34948 3 106014598 to 106014607 9 - TSS region transcription start site region 34948
Tssr34949 3 106014609 to 106014624 15 - TSS region transcription start site region 34949
Tssr34950 3 106014630 to 106014643 13 - TSS region transcription start site region 34950
Chil5 3 106016919 to 106032814 15895 - protein coding gene chitinase-like 5
Tssr34951 3 106032879 to 106032888 9 - TSS region transcription start site region 34951
Tssr34952 3 106032893 to 106032904 11 - TSS region transcription start site region 34952
Tssr34953 3 106032905 to 106032953 48 - TSS region transcription start site region 34953
Tssr31102 3 106034661 to 106034692 31 + TSS region transcription start site region 31102
Gm4540 3 106034664 to 106035065 401 + pseudogene predicted gene 4540
Tssr31103 3 106034778 to 106034818 40 + TSS region transcription start site region 31103
Gm9504 3 106042964 to 106043431 467 - pseudogene predicted gene 9504
Gm4248 3 106091034 to 106091349 315 + pseudogene predicted pseudogene 4248
Tssr31104 3 106113361 to 106113378 17 + TSS region transcription start site region 31104
Chia1 3 106113382 to 106132118 18736 + protein coding gene chitinase, acidic 1