Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:105771779-105875853

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rap1a	3	105727267 to 105801336	74069	-	protein coding gene	RAS-related protein 1a
Gm43330	3	105782875 to 105785027	2152	-	sense intronic lncRNA gene	predicted gene 43330
Tssr34929	3	105785856 to 105785860	4	-	TSS region	transcription start site region 34929
Gm43331	3	105787633 to 105789321	1688	-	sense intronic lncRNA gene	predicted gene 43331
Cpgi13662	3	105800616 to 105801802	1186		CpG island	CpG island 13662
Tssr34930	3	105800675 to 105800687	12	-	TSS region	transcription start site region 34930
Tssr34931	3	105801299 to 105801315	16	-	TSS region	transcription start site region 34931
Tssr34932	3	105801323 to 105801377	54	-	TSS region	transcription start site region 34932
Tssr31081	3	105803591 to 105803602	11	+	TSS region	transcription start site region 31081
Tssr31082	3	105803622 to 105803633	11	+	TSS region	transcription start site region 31082
Tssr31083	3	105803920 to 105803941	21	+	TSS region	transcription start site region 31083
Tssr31084	3	105815530 to 105815555	25	+	TSS region	transcription start site region 31084
Gm5547	3	105815567 to 105817359	1792	+	lincRNA gene	predicted gene 5547
Gm46838	3	105821779 to 105825853	4074	-	lncRNA gene	predicted gene, 46838
Tssr34933	3	105825783 to 105825816	33	-	TSS region	transcription start site region 34933
Tssr31085	3	105870885 to 105870895	10	+	TSS region	transcription start site region 31085
Tssr31086	3	105870898 to 105870912	14	+	TSS region	transcription start site region 31086
Tmigd3	3	105870903 to 105924042	53139	+	protein coding gene	transmembrane and immunoglobulin domain containing 3