Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:105050052-105673345

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cttnbp2nl 3 105001915 to 105053146 51231 - protein coding gene CTTNBP2 N-terminal like
Tssr34913 3 105052560 to 105052574 14 - TSS region transcription start site region 34913
Cpgi13657 3 105052575 to 105053243 668 CpG island CpG island 13657
Tssr34914 3 105052687 to 105052717 30 - TSS region transcription start site region 34914
Tssr34915 3 105052916 to 105052938 22 - TSS region transcription start site region 34915
Tssr34916 3 105052948 to 105052987 39 - TSS region transcription start site region 34916
Tssr34917 3 105053125 to 105053151 26 - TSS region transcription start site region 34917
Tssr34918 3 105054876 to 105054884 8 - TSS region transcription start site region 34918
Cpgi13658 3 105058849 to 105059011 162 CpG island CpG island 13658
4930564D02Rik 3 105066844 to 105078806 11962 + protein coding gene RIKEN cDNA 4930564D02 gene
Tssr31068 3 105094991 to 105094996 5 + TSS region transcription start site region 31068
Gm40118 3 105107398 to 105134972 27574 + lncRNA gene predicted gene, 40118
Gm34837 3 105355052 to 105368345 13293 + lncRNA gene predicted gene, 34837
Tssr34919 3 105426534 to 105426541 7 - TSS region transcription start site region 34919
Tssr34920 3 105426562 to 105426569 7 - TSS region transcription start site region 34920
Tssr34921 3 105426590 to 105426601 11 - TSS region transcription start site region 34921
Kcnd3os 3 105448190 to 105452955 4765 - antisense lncRNA gene potassium voltage-gated channel, Shal-related family, member 3, opposite strand
Cpgi13659 3 105451007 to 105453212 2205 CpG island CpG island 13659
Tssr31069 3 105451849 to 105451937 88 + TSS region transcription start site region 31069
Tssr31070 3 105451967 to 105451974 7 + TSS region transcription start site region 31070
Tssr31071 3 105452104 to 105452145 41 + TSS region transcription start site region 31071
Tssr31072 3 105452149 to 105452177 28 + TSS region transcription start site region 31072
Tssr31073 3 105452326 to 105452365 39 + TSS region transcription start site region 31073
Kcnd3 3 105452330 to 105674002 221672 + protein coding gene potassium voltage-gated channel, Shal-related family, member 3
Tssr34922 3 105488033 to 105488064 31 - TSS region transcription start site region 34922
Tssr31074 3 105491534 to 105491544 10 + TSS region transcription start site region 31074
Gm43847 3 105502907 to 105504846 1939 + sense intronic lncRNA gene predicted gene 43847
Tssr31075 3 105526051 to 105526061 10 + TSS region transcription start site region 31075
Tssr31076 3 105558483 to 105558497 14 + TSS region transcription start site region 31076
Tssr996 3 105635691 to 105635693 2 + TSS region transcription start site region 996
Tssr31077 3 105639882 to 105639886 4 + TSS region transcription start site region 31077