Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:104962560-105142574

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13654 3 104961087 to 104962654 1567 CpG island CpG island 13654
Cpgi13655 3 104967631 to 104968401 770 CpG island CpG island 13655
Gm46819 3 104981598 to 104986200 4602 + lncRNA gene predicted gene, 46819
Cpgi13656 3 104992720 to 104993069 349 CpG island CpG island 13656
Gm40117 3 104994032 to 105004005 9973 + antisense lncRNA gene predicted gene, 40117
Cttnbp2nl 3 105001915 to 105053146 51231 - protein coding gene CTTNBP2 N-terminal like
Gm40116 3 105008062 to 105017762 9700 + lncRNA gene predicted gene, 40116
Tssr34912 3 105019964 to 105019968 4 - TSS region transcription start site region 34912
Tssr34913 3 105052560 to 105052574 14 - TSS region transcription start site region 34913
Cpgi13657 3 105052575 to 105053243 668 CpG island CpG island 13657
Tssr34914 3 105052687 to 105052717 30 - TSS region transcription start site region 34914
Tssr34915 3 105052916 to 105052938 22 - TSS region transcription start site region 34915
Tssr34916 3 105052948 to 105052987 39 - TSS region transcription start site region 34916
Tssr34917 3 105053125 to 105053151 26 - TSS region transcription start site region 34917
Tssr34918 3 105054876 to 105054884 8 - TSS region transcription start site region 34918
Cpgi13658 3 105058849 to 105059011 162 CpG island CpG island 13658
4930564D02Rik 3 105066844 to 105078806 11962 + protein coding gene RIKEN cDNA 4930564D02 gene
Tssr31068 3 105094991 to 105094996 5 + TSS region transcription start site region 31068
Gm40118 3 105107398 to 105134972 27574 + lncRNA gene predicted gene, 40118