Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:104901915-105153146

29 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
St7l	3	104864506 to 104930064	65558	+	protein coding gene	suppression of tumorigenicity 7-like
Tssr31067	3	104908596 to 104908605	9	+	TSS region	transcription start site region 31067
Gm4525	3	104915910 to 104916163	253	-	pseudogene	predicted gene 4525
Tssr34908	3	104916194 to 104916196	2	-	TSS region	transcription start site region 34908
D3Mit214	3	104922346 to 104922495	149		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 214
Wnt2b	3	104945272 to 104961921	16649	-	protein coding gene	wingless-type MMTV integration site family, member 2B
Gm43846	3	104957442 to 104958373	931	-	sense intronic lncRNA gene	predicted gene 43846
Cpgi13654	3	104961087 to 104962654	1567		CpG island	CpG island 13654
Tssr34909	3	104961668 to 104961686	18	-	TSS region	transcription start site region 34909
Tssr34910	3	104961695 to 104961728	33	-	TSS region	transcription start site region 34910
Tssr34911	3	104961734 to 104961745	11	-	TSS region	transcription start site region 34911
Cpgi13655	3	104967631 to 104968401	770		CpG island	CpG island 13655
Gm46819	3	104981598 to 104986200	4602	+	lncRNA gene	predicted gene, 46819
Cpgi13656	3	104992720 to 104993069	349		CpG island	CpG island 13656
Gm40117	3	104994032 to 105004005	9973	+	antisense lncRNA gene	predicted gene, 40117
Cttnbp2nl	3	105001915 to 105053146	51231	-	protein coding gene	CTTNBP2 N-terminal like
Gm40116	3	105008062 to 105017762	9700	+	lncRNA gene	predicted gene, 40116
Tssr34912	3	105019964 to 105019968	4	-	TSS region	transcription start site region 34912
Tssr34913	3	105052560 to 105052574	14	-	TSS region	transcription start site region 34913
Cpgi13657	3	105052575 to 105053243	668		CpG island	CpG island 13657
Tssr34914	3	105052687 to 105052717	30	-	TSS region	transcription start site region 34914
Tssr34915	3	105052916 to 105052938	22	-	TSS region	transcription start site region 34915
Tssr34916	3	105052948 to 105052987	39	-	TSS region	transcription start site region 34916
Tssr34917	3	105053125 to 105053151	26	-	TSS region	transcription start site region 34917
Tssr34918	3	105054876 to 105054884	8	-	TSS region	transcription start site region 34918
Cpgi13658	3	105058849 to 105059011	162		CpG island	CpG island 13658
4930564D02Rik	3	105066844 to 105078806	11962	+	protein coding gene	RIKEN cDNA 4930564D02 gene
Tssr31068	3	105094991 to 105094996	5	+	TSS region	transcription start site region 31068
Gm40118	3	105107398 to 105134972	27574	+	lncRNA gene	predicted gene, 40118