Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:104856915-105198146

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Capza1 3 104822785 to 104864505 41720 - protein coding gene capping protein (actin filament) muscle Z-line, alpha 1
Tssr34903 3 104863818 to 104863828 10 - TSS region transcription start site region 34903
Tssr34904 3 104863868 to 104863871 3 - TSS region transcription start site region 34904
Tssr31064 3 104863981 to 104863986 5 + TSS region transcription start site region 31064
Cpgi13653 3 104864164 to 104865564 1400 CpG island CpG island 13653
Tssr34905 3 104864420 to 104864450 30 - TSS region transcription start site region 34905
Tssr31065 3 104864459 to 104864512 53 + TSS region transcription start site region 31065
St7l 3 104864506 to 104930064 65558 + protein coding gene suppression of tumorigenicity 7-like
Tssr34906 3 104864964 to 104865045 81 - TSS region transcription start site region 34906
Tssr31066 3 104865062 to 104865099 37 + TSS region transcription start site region 31066
Tssr34907 3 104865088 to 104865117 29 - TSS region transcription start site region 34907
Tssr31067 3 104908596 to 104908605 9 + TSS region transcription start site region 31067
Gm4525 3 104915910 to 104916163 253 - pseudogene predicted gene 4525
Tssr34908 3 104916194 to 104916196 2 - TSS region transcription start site region 34908
D3Mit214 3 104922346 to 104922495 149 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 214
Wnt2b 3 104945272 to 104961921 16649 - protein coding gene wingless-type MMTV integration site family, member 2B
Gm43846 3 104957442 to 104958373 931 - sense intronic lncRNA gene predicted gene 43846
Cpgi13654 3 104961087 to 104962654 1567 CpG island CpG island 13654
Tssr34909 3 104961668 to 104961686 18 - TSS region transcription start site region 34909
Tssr34910 3 104961695 to 104961728 33 - TSS region transcription start site region 34910
Tssr34911 3 104961734 to 104961745 11 - TSS region transcription start site region 34911
Cpgi13655 3 104967631 to 104968401 770 CpG island CpG island 13655
Gm46819 3 104981598 to 104986200 4602 + lncRNA gene predicted gene, 46819
Cpgi13656 3 104992720 to 104993069 349 CpG island CpG island 13656
Gm40117 3 104994032 to 105004005 9973 + antisense lncRNA gene predicted gene, 40117
Cttnbp2nl 3 105001915 to 105053146 51231 - protein coding gene CTTNBP2 N-terminal like
Gm40116 3 105008062 to 105017762 9700 + lncRNA gene predicted gene, 40116
Tssr34912 3 105019964 to 105019968 4 - TSS region transcription start site region 34912
Tssr34913 3 105052560 to 105052574 14 - TSS region transcription start site region 34913
Cpgi13657 3 105052575 to 105053243 668 CpG island CpG island 13657
Tssr34914 3 105052687 to 105052717 30 - TSS region transcription start site region 34914
Tssr34915 3 105052916 to 105052938 22 - TSS region transcription start site region 34915
Tssr34916 3 105052948 to 105052987 39 - TSS region transcription start site region 34916
Tssr34917 3 105053125 to 105053151 26 - TSS region transcription start site region 34917
Tssr34918 3 105054876 to 105054884 8 - TSS region transcription start site region 34918
Cpgi13658 3 105058849 to 105059011 162 CpG island CpG island 13658
4930564D02Rik 3 105066844 to 105078806 11962 + protein coding gene RIKEN cDNA 4930564D02 gene
Tssr31068 3 105094991 to 105094996 5 + TSS region transcription start site region 31068
Gm40118 3 105107398 to 105134972 27574 + lncRNA gene predicted gene, 40118