Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Magi3 | 3 | 207115 | - | protein coding gene | membrane associated guanylate kinase, WW and PDZ domain containing 3 | |
D3Wsu167e | 3 | 248 | DNA segment | DNA segment, Chr 3, Wayne State University 167, expressed | ||
Gm23077 | 3 | 115 | + | snoRNA gene | predicted gene, 23077 | |
Cpgi13643 | 3 | 1778 | CpG island | CpG island 13643 | ||
Tssr34876 | 3 | 11 | - | TSS region | transcription start site region 34876 | |
Tssr34877 | 3 | 18 | - | TSS region | transcription start site region 34877 | |
Tssr31043 | 3 | 17 | + | TSS region | transcription start site region 31043 | |
2010002M09Rik | 3 | 1198 | unclassified gene | RIKEN cDNA 2010002M09 gene | ||
Twq3 | 3 | 0 | QTL | testis weight QTL 3 | ||
Gm5546 | 3 | 8535 | - | lincRNA gene | predicted gene 5546 | |
Gm38412 | 3 | 8374 | + | antisense lncRNA gene | predicted gene, 38412 | |
Gm9273 | 3 | 714 | - | pseudogene | predicted gene 9273 | |
Lrig2 | 3 | 57938 | - | protein coding gene | leucine-rich repeats and immunoglobulin-like domains 2 | |
Tssr34878 | 3 | 4 | - | TSS region | transcription start site region 34878 | |
Tssr31044 | 3 | 2 | + | TSS region | transcription start site region 31044 | |
Gm43696 | 3 | 6070 | - | sense intronic lncRNA gene | predicted gene 43696 | |
Tssr34879 | 3 | 3 | - | TSS region | transcription start site region 34879 | |
Tssr994 | 3 | 21 | + | TSS region | transcription start site region 994 | |
A530041M06Rik | 3 | 2287 | - | sense intronic lncRNA gene | RIKEN cDNA A530041M06 gene | |
4930509H03Rik | 3 | 1214 | - | sense intronic lncRNA gene | RIKEN cDNA 4930509H03 gene | |
Cpgi13644 | 3 | 1179 | CpG island | CpG island 13644 | ||
Tssr995 | 3 | 9 | - | TSS region | transcription start site region 995 | |
Tssr34880 | 3 | 121 | - | TSS region | transcription start site region 34880 | |
Tssr34881 | 3 | 16 | - | TSS region | transcription start site region 34881 | |
Tssr34882 | 3 | 19 | - | TSS region | transcription start site region 34882 | |
Gm34490 | 3 | 16471 | + | lncRNA gene | predicted gene, 34490 | |
D3Ertd711e | 3 | 221 | DNA segment | DNA segment, Chr 3, ERATO Doi 711, expressed | ||
Gm26091 | 3 | 81 | - | snRNA gene | predicted gene, 26091 | |
Gm43582 | 3 | 342 | - | pseudogene | predicted gene 43582 | |
Tssr34883 | 3 | 4 | - | TSS region | transcription start site region 34883 | |
Cpgi13645 | 3 | 1631 | CpG island | CpG island 13645 | ||
Tssr34884 | 3 | 13 | - | TSS region | transcription start site region 34884 | |
Tssr34885 | 3 | 10 | - | TSS region | transcription start site region 34885 | |
Tssr31045 | 3 | 17 | + | TSS region | transcription start site region 31045 | |
Slc16a1 | 3 | 19794 | + | protein coding gene | solute carrier family 16 (monocarboxylic acid transporters), member 1 | |
Gm43581 | 3 | 2863 | + | sense intronic lncRNA gene | predicted gene 43581 | |
Tssr31046 | 3 | 4 | + | TSS region | transcription start site region 31046 | |
Gm43585 | 3 | 1402 | + | sense intronic lncRNA gene | predicted gene 43585 | |
Tssr31047 | 3 | 2 | + | TSS region | transcription start site region 31047 | |
Tssr31048 | 3 | 4 | + | TSS region | transcription start site region 31048 | |
Gm29561 | 3 | 2796 | - | lincRNA gene | predicted gene 29561 | |
Gm29560 | 3 | 2978 | - | protein coding gene | predicted gene 29560 | |
Cpgi13646 | 3 | 332 | CpG island | CpG island 13646 | ||
Gm34548 | 3 | 3077 | - | lncRNA gene | predicted gene, 34548 | |
Gm24223 | 3 | 89 | + | snRNA gene | predicted gene, 24223 | |
Cpgi13647 | 3 | 282 | CpG island | CpG island 13647 | ||
Gm29572 | 3 | 4325 | + | protein coding gene | predicted gene 29572 | |
Gm6485 | 3 | 438 | - | pseudogene | predicted gene 6485 | |
Gm43584 | 3 | 20147 | - | unclassified non-coding RNA gene | predicted gene 43584 | |
Cpgi13648 | 3 | 328 | CpG island | CpG island 13648 | ||
Tafa3 | 3 | 12184 | - | protein coding gene | TAFA chemokine like family member 3 | |
Tssr31049 | 3 | 8 | + | TSS region | transcription start site region 31049 | |
Tssr34886 | 3 | 2 | - | TSS region | transcription start site region 34886 | |
Tssr34887 | 3 | 4 | - | TSS region | transcription start site region 34887 | |
Cpgi13649 | 3 | 351 | CpG island | CpG island 13649 | ||
Tssr34888 | 3 | 10 | - | TSS region | transcription start site region 34888 | |
Cpgi13650 | 3 | 1127 | CpG island | CpG island 13650 | ||
Tssr31050 | 3 | 8 | + | TSS region | transcription start site region 31050 | |
Tssr34889 | 3 | 15 | - | TSS region | transcription start site region 34889 | |
Tssr31051 | 3 | 80 | + | TSS region | transcription start site region 31051 | |
Ppm1j | 3 | 4962 | + | protein coding gene | protein phosphatase 1J | |
Tssr31052 | 3 | 14 | + | TSS region | transcription start site region 31052 | |
Tssr31053 | 3 | 15 | + | TSS region | transcription start site region 31053 | |
Tssr31054 | 3 | 14 | + | TSS region | transcription start site region 31054 | |
Tssr31055 | 3 | 17 | + | TSS region | transcription start site region 31055 | |
Cpgi13651 | 3 | 1153 | CpG island | CpG island 13651 | ||
Tssr31056 | 3 | 23 | + | TSS region | transcription start site region 31056 | |
Tssr31057 | 3 | 48 | + | TSS region | transcription start site region 31057 | |
Tssr31058 | 3 | 13 | + | TSS region | transcription start site region 31058 | |
Tssr31059 | 3 | 20 | + | TSS region | transcription start site region 31059 | |
Rhoc | 3 | 5425 | + | protein coding gene | ras homolog family member C | |
Tssr34890 | 3 | 17 | - | TSS region | transcription start site region 34890 | |
Tssr31060 | 3 | 20 | + | TSS region | transcription start site region 31060 | |
Tssr31061 | 3 | 28 | + | TSS region | transcription start site region 31061 | |
Tssr31062 | 3 | 24 | + | TSS region | transcription start site region 31062 | |
Tssr34891 | 3 | 3 | - | TSS region | transcription start site region 34891 | |
Mov10 | 3 | 23727 | - | protein coding gene | Moloney leukemia virus 10 | |
Tssr31063 | 3 | 12 | + | TSS region | transcription start site region 31063 | |
Tssr34892 | 3 | 13 | - | TSS region | transcription start site region 34892 | |
Tssr34893 | 3 | 7 | - | TSS region | transcription start site region 34893 | |
Cpgi13652 | 3 | 1204 | CpG island | CpG island 13652 | ||
Tssr34894 | 3 | 23 | - | TSS region | transcription start site region 34894 | |
Tssr34895 | 3 | 22 | - | TSS region | transcription start site region 34895 | |
Tssr34896 | 3 | 9 | - | TSS region | transcription start site region 34896 | |
Tssr34897 | 3 | 13 | - | TSS region | transcription start site region 34897 | |
Tssr34898 | 3 | 27 | - | TSS region | transcription start site region 34898 | |
Tssr34899 | 3 | 11 | - | TSS region | transcription start site region 34899 | |
Tssr34900 | 3 | 24 | - | TSS region | transcription start site region 34900 | |
Tssr34901 | 3 | 33 | - | TSS region | transcription start site region 34901 | |
Capza1 | 3 | 41720 | - | protein coding gene | capping protein (actin filament) muscle Z-line, alpha 1 | |
Gm42658 | 3 | 1574 | - | sense intronic lncRNA gene | predicted gene 42658 | |
Gm42659 | 3 | 1753 | - | sense intronic lncRNA gene | predicted gene 42659 | |
Tssr34902 | 3 | 4 | - | TSS region | transcription start site region 34902 | |
Tssr34903 | 3 | 10 | - | TSS region | transcription start site region 34903 | |
Tssr34904 | 3 | 3 | - | TSS region | transcription start site region 34904 | |
Tssr31064 | 3 | 5 | + | TSS region | transcription start site region 31064 | |
Cpgi13653 | 3 | 1400 | CpG island | CpG island 13653 | ||
Tssr34905 | 3 | 30 | - | TSS region | transcription start site region 34905 | |
Tssr31065 | 3 | 53 | + | TSS region | transcription start site region 31065 | |
St7l | 3 | 65558 | + | protein coding gene | suppression of tumorigenicity 7-like | |
Tssr34906 | 3 | 81 | - | TSS region | transcription start site region 34906 | |
Tssr31066 | 3 | 37 | + | TSS region | transcription start site region 31066 | |
Tssr34907 | 3 | 29 | - | TSS region | transcription start site region 34907 | |
Tssr31067 | 3 | 9 | + | TSS region | transcription start site region 31067 | |
Gm4525 | 3 | 253 | - | pseudogene | predicted gene 4525 | |
Tssr34908 | 3 | 2 | - | TSS region | transcription start site region 34908 | |
D3Mit214 | 3 | 149 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 214 | ||
Wnt2b | 3 | 16649 | - | protein coding gene | wingless-type MMTV integration site family, member 2B | |
Gm43846 | 3 | 931 | - | sense intronic lncRNA gene | predicted gene 43846 | |
Cpgi13654 | 3 | 1567 | CpG island | CpG island 13654 | ||
Tssr34909 | 3 | 18 | - | TSS region | transcription start site region 34909 | |
Tssr34910 | 3 | 33 | - | TSS region | transcription start site region 34910 | |
Tssr34911 | 3 | 11 | - | TSS region | transcription start site region 34911 | |
Cpgi13655 | 3 | 770 | CpG island | CpG island 13655 | ||
Gm46819 | 3 | 4602 | + | lncRNA gene | predicted gene, 46819 | |
Cpgi13656 | 3 | 349 | CpG island | CpG island 13656 | ||
Gm40117 | 3 | 9973 | + | antisense lncRNA gene | predicted gene, 40117 | |
Cttnbp2nl | 3 | 51231 | - | protein coding gene | CTTNBP2 N-terminal like | |
Gm40116 | 3 | 9700 | + | lncRNA gene | predicted gene, 40116 | |
Tssr34912 | 3 | 4 | - | TSS region | transcription start site region 34912 | |
Tssr34913 | 3 | 14 | - | TSS region | transcription start site region 34913 | |
Cpgi13657 | 3 | 668 | CpG island | CpG island 13657 | ||
Tssr34914 | 3 | 30 | - | TSS region | transcription start site region 34914 | |
Tssr34915 | 3 | 22 | - | TSS region | transcription start site region 34915 | |
Tssr34916 | 3 | 39 | - | TSS region | transcription start site region 34916 | |
Tssr34917 | 3 | 26 | - | TSS region | transcription start site region 34917 | |
Tssr34918 | 3 | 8 | - | TSS region | transcription start site region 34918 | |
Cpgi13658 | 3 | 162 | CpG island | CpG island 13658 | ||
4930564D02Rik | 3 | 11962 | + | protein coding gene | RIKEN cDNA 4930564D02 gene | |
Tssr31068 | 3 | 5 | + | TSS region | transcription start site region 31068 | |
Gm40118 | 3 | 27574 | + | lncRNA gene | predicted gene, 40118 | |
Gm34837 | 3 | 13293 | + | lncRNA gene | predicted gene, 34837 | |
Tssr34919 | 3 | 7 | - | TSS region | transcription start site region 34919 | |
Tssr34920 | 3 | 7 | - | TSS region | transcription start site region 34920 | |
Tssr34921 | 3 | 11 | - | TSS region | transcription start site region 34921 | |
Kcnd3os | 3 | 4765 | - | antisense lncRNA gene | potassium voltage-gated channel, Shal-related family, member 3, opposite strand | |
Cpgi13659 | 3 | 2205 | CpG island | CpG island 13659 | ||
Tssr31069 | 3 | 88 | + | TSS region | transcription start site region 31069 | |
Tssr31070 | 3 | 7 | + | TSS region | transcription start site region 31070 | |
Tssr31071 | 3 | 41 | + | TSS region | transcription start site region 31071 | |
Tssr31072 | 3 | 28 | + | TSS region | transcription start site region 31072 | |
Tssr31073 | 3 | 39 | + | TSS region | transcription start site region 31073 | |
Kcnd3 | 3 | 221672 | + | protein coding gene | potassium voltage-gated channel, Shal-related family, member 3 | |
Tssr34922 | 3 | 31 | - | TSS region | transcription start site region 34922 | |
Tssr31074 | 3 | 10 | + | TSS region | transcription start site region 31074 | |
Gm43847 | 3 | 1939 | + | sense intronic lncRNA gene | predicted gene 43847 | |
Tssr31075 | 3 | 10 | + | TSS region | transcription start site region 31075 | |
Tssr31076 | 3 | 14 | + | TSS region | transcription start site region 31076 | |
Tssr996 | 3 | 2 | + | TSS region | transcription start site region 996 | |
Tssr31077 | 3 | 4 | + | TSS region | transcription start site region 31077 | |
Ddx20 | 3 | 9304 | - | protein coding gene | DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 | |
Cpgi13660 | 3 | 1257 | CpG island | CpG island 13660 | ||
Tssr34923 | 3 | 33 | - | TSS region | transcription start site region 34923 | |
Tssr34924 | 3 | 36 | - | TSS region | transcription start site region 34924 | |
Tssr34925 | 3 | 39 | - | TSS region | transcription start site region 34925 | |
Tssr34926 | 3 | 15 | - | TSS region | transcription start site region 34926 | |
Tssr34927 | 3 | 28 | - | TSS region | transcription start site region 34927 | |
Tssr31078 | 3 | 14 | + | TSS region | transcription start site region 31078 | |
Cpgi13661 | 3 | 1015 | CpG island | CpG island 13661 | ||
Inka2 | 3 | 16243 | + | protein coding gene | inka box actin regulator 2 | |
Tssr31079 | 3 | 23 | + | TSS region | transcription start site region 31079 | |
Tssr31080 | 3 | 9 | + | TSS region | transcription start site region 31080 | |
Gm43848 | 3 | 1246 | - | lincRNA gene | predicted gene 43848 | |
Rap1a | 3 | 74069 | - | protein coding gene | RAS-related protein 1a | |
Gm43328 | 3 | 1433 | - | sense intronic lncRNA gene | predicted gene 43328 | |
Gm43329 | 3 | 3231 | - | sense intronic lncRNA gene | predicted gene 43329 | |
Tssr34928 | 3 | 6 | - | TSS region | transcription start site region 34928 | |
Gm43330 | 3 | 2152 | - | sense intronic lncRNA gene | predicted gene 43330 | |
Tssr34929 | 3 | 4 | - | TSS region | transcription start site region 34929 | |
Gm43331 | 3 | 1688 | - | sense intronic lncRNA gene | predicted gene 43331 | |
Cpgi13662 | 3 | 1186 | CpG island | CpG island 13662 | ||
Tssr34930 | 3 | 12 | - | TSS region | transcription start site region 34930 | |
Tssr34931 | 3 | 16 | - | TSS region | transcription start site region 34931 | |
Tssr34932 | 3 | 54 | - | TSS region | transcription start site region 34932 | |
Tssr31081 | 3 | 11 | + | TSS region | transcription start site region 31081 | |
Tssr31082 | 3 | 11 | + | TSS region | transcription start site region 31082 | |
Tssr31083 | 3 | 21 | + | TSS region | transcription start site region 31083 | |
Tssr31084 | 3 | 25 | + | TSS region | transcription start site region 31084 | |
Gm5547 | 3 | 1792 | + | lincRNA gene | predicted gene 5547 | |
Gm46838 | 3 | 4074 | - | lncRNA gene | predicted gene, 46838 | |
Tssr34933 | 3 | 33 | - | TSS region | transcription start site region 34933 | |
Tssr31085 | 3 | 10 | + | TSS region | transcription start site region 31085 | |
Tssr31086 | 3 | 14 | + | TSS region | transcription start site region 31086 | |
Tmigd3 | 3 | 53139 | + | protein coding gene | transmembrane and immunoglobulin domain containing 3 | |
Tssr31087 | 3 | 20 | + | TSS region | transcription start site region 31087 | |
Tssr34934 | 3 | 11 | - | TSS region | transcription start site region 34934 | |
Tssr34935 | 3 | 11 | - | TSS region | transcription start site region 34935 | |
Tssr31088 | 3 | 46 | + | TSS region | transcription start site region 31088 | |
Adora3 | 3 | 4507 | + | protein coding gene | adenosine A3 receptor | |
Tssr31089 | 3 | 8 | + | TSS region | transcription start site region 31089 | |
Tssr31090 | 3 | 5 | + | TSS region | transcription start site region 31090 | |
Tssr31091 | 3 | 17 | + | TSS region | transcription start site region 31091 | |
I830077J02Rik | 3 | 7131 | - | protein coding gene | RIKEN cDNA I830077J02 gene | |
Tssr34936 | 3 | 20 | - | TSS region | transcription start site region 34936 | |
Tssr34937 | 3 | 32 | - | TSS region | transcription start site region 34937 | |
Tssr34938 | 3 | 32 | - | TSS region | transcription start site region 34938 | |
Tssr34939 | 3 | 5 | - | TSS region | transcription start site region 34939 | |
Tssr34940 | 3 | 9 | - | TSS region | transcription start site region 34940 | |
Tssr34941 | 3 | 14 | - | TSS region | transcription start site region 34941 | |
Tssr34942 | 3 | 24 | - | TSS region | transcription start site region 34942 |