Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:104191783-104520318

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Magi3 3 104013259 to 104220374 207115 - protein coding gene membrane associated guanylate kinase, WW and PDZ domain containing 3
D3Wsu167e 3 104193194 to 104193442 248 DNA segment DNA segment, Chr 3, Wayne State University 167, expressed
Gm23077 3 104201110 to 104201225 115 + snoRNA gene predicted gene, 23077
Cpgi13643 3 104219226 to 104221004 1778 CpG island CpG island 13643
Tssr34876 3 104220346 to 104220357 11 - TSS region transcription start site region 34876
Tssr34877 3 104220360 to 104220378 18 - TSS region transcription start site region 34877
Tssr31043 3 104220871 to 104220888 17 + TSS region transcription start site region 31043
2010002M09Rik 3 104220882 to 104222080 1198 unclassified gene RIKEN cDNA 2010002M09 gene
Twq3 3 104320699 to 104320699 0 QTL testis weight QTL 3
Gm5546 3 104351783 to 104360318 8535 - lincRNA gene predicted gene 5546
Gm38412 3 104409161 to 104417535 8374 + antisense lncRNA gene predicted gene, 38412
Gm9273 3 104417613 to 104418327 714 - pseudogene predicted gene 9273
Lrig2 3 104453980 to 104511918 57938 - protein coding gene leucine-rich repeats and immunoglobulin-like domains 2
Tssr34878 3 104454586 to 104454590 4 - TSS region transcription start site region 34878
Tssr31044 3 104456623 to 104456625 2 + TSS region transcription start site region 31044
Gm43696 3 104470660 to 104476730 6070 - sense intronic lncRNA gene predicted gene 43696
Tssr34879 3 104476704 to 104476707 3 - TSS region transcription start site region 34879
Tssr994 3 104478802 to 104478823 21 + TSS region transcription start site region 994
A530041M06Rik 3 104499320 to 104501607 2287 - sense intronic lncRNA gene RIKEN cDNA A530041M06 gene
4930509H03Rik 3 104510099 to 104511313 1214 - sense intronic lncRNA gene RIKEN cDNA 4930509H03 gene
Cpgi13644 3 104511255 to 104512434 1179 CpG island CpG island 13644
Tssr995 3 104511749 to 104511758 9 - TSS region transcription start site region 995
Tssr34880 3 104511812 to 104511933 121 - TSS region transcription start site region 34880