Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:10317817-10540102

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Impa1 3 10311956 to 10331439 19483 - protein coding gene inositol (myo)-1(or 4)-monophosphatase 1
Gm38303 3 10321712 to 10335681 13969 - protein coding gene predicted gene, 38303
Cpgi12981 3 10330983 to 10331583 600 CpG island CpG island 12981
Tssr32612 3 10331284 to 10331286 2 - TSS region transcription start site region 32612
Tssr32613 3 10331358 to 10331425 67 - TSS region transcription start site region 32613
Slc10a5 3 10331734 to 10335656 3922 - protein coding gene solute carrier family 10 (sodium/bile acid cotransporter family), member 5
Tssr32614 3 10335409 to 10335441 32 - TSS region transcription start site region 32614
Tssr32615 3 10335650 to 10335661 11 - TSS region transcription start site region 32615
Tssr32616 3 10335676 to 10335687 11 - TSS region transcription start site region 32616
Tssr32617 3 10335689 to 10335707 18 - TSS region transcription start site region 32617
Tssr32618 3 10335715 to 10335724 9 - TSS region transcription start site region 32618
Zfand1 3 10339953 to 10351317 11364 - protein coding gene zinc finger, AN1-type domain 1
Tssr28367 3 10342788 to 10342837 49 + TSS region transcription start site region 28367
Tssr32619 3 10346035 to 10346039 4 - TSS region transcription start site region 32619
Tssr32620 3 10346105 to 10346125 20 - TSS region transcription start site region 32620
Cpgi12982 3 10350925 to 10351566 641 CpG island CpG island 12982
Tssr28368 3 10350972 to 10350981 9 + TSS region transcription start site region 28368
Tssr32621 3 10351314 to 10351342 28 - TSS region transcription start site region 32621
Tssr28369 3 10351511 to 10351552 41 + TSS region transcription start site region 28369
Cpgi12983 3 10366857 to 10367247 390 CpG island CpG island 12983
Tssr28370 3 10366903 to 10366922 19 + TSS region transcription start site region 28370
Tssr28371 3 10366927 to 10366963 36 + TSS region transcription start site region 28371
Tssr28372 3 10366967 to 10366987 20 + TSS region transcription start site region 28372
Chmp4c 3 10366973 to 10391005 24032 + protein coding gene charged multivesicular body protein 4C
Tssr28373 3 10366992 to 10367001 9 + TSS region transcription start site region 28373
Tssr28374 3 10367009 to 10367026 17 + TSS region transcription start site region 28374
Snx16 3 10417817 to 10440102 22285 - protein coding gene sorting nexin 16
5430403G19Rik 3 10426593 to 10428865 2272 unclassified non-coding RNA gene RIKEN cDNA 5430403G19 gene
A630040H13Rik 3 10430763 to 10434206 3443 unclassified gene RIKEN cDNA A630040H13 gene
Cpgi12984 3 10439393 to 10440235 842 CpG island CpG island 12984
Tssr32622 3 10439960 to 10439977 17 - TSS region transcription start site region 32622
Tssr32623 3 10439995 to 10440006 11 - TSS region transcription start site region 32623
Tssr32624 3 10440008 to 10440022 14 - TSS region transcription start site region 32624
Tssr32625 3 10440054 to 10440127 73 - TSS region transcription start site region 32625