Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:103169714-103389780

30 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dennd2c	3	103102656 to 103169738	67082	+	protein coding gene	DENN/MADD domain containing 2C
Cpgi13634	3	103171569 to 103172314	745		CpG island	CpG island 13634
Bcas2	3	103171660 to 103179163	7503	+	protein coding gene	breast carcinoma amplified sequence 2
Tssr30969	3	103171714 to 103171725	11	+	TSS region	transcription start site region 30969
Tssr30970	3	103171728 to 103171767	39	+	TSS region	transcription start site region 30970
Gm27024	3	103179689 to 103180443	754	-	pseudogene	predicted gene, 27024
Cpgi13635	3	103182931 to 103183143	212		CpG island	CpG island 13635
Gm40113	3	103189293 to 103196724	7431	-	lncRNA gene	predicted gene, 40113
2410024N13Rik	3	103198226 to 103198975	749	-	pseudogene	RIKEN cDNA 2410024N13 gene
Gm43060	3	103246975 to 103247263	288	-	pseudogene	predicted gene 43060
Tssr30971	3	103263060 to 103263067	7	+	TSS region	transcription start site region 30971
Cpgi13636	3	103279194 to 103280718	1524		CpG island	CpG island 13636
Trim33	3	103279293 to 103358770	79477	+	protein coding gene	tripartite motif-containing 33
Tssr30972	3	103279714 to 103279780	66	+	TSS region	transcription start site region 30972
Tssr30973	3	103279781 to 103279799	18	+	TSS region	transcription start site region 30973
Tssr30974	3	103279849 to 103279873	24	+	TSS region	transcription start site region 30974
D3Wsu106e	3	103296015 to 103296264	249		DNA segment	DNA segment, Chr 3, Wayne State University 106, expressed
Tssr30975	3	103309761 to 103309767	6	+	TSS region	transcription start site region 30975
Tssr30976	3	103321898 to 103321903	5	+	TSS region	transcription start site region 30976
Tssr30977	3	103325414 to 103325420	6	+	TSS region	transcription start site region 30977
Tssr30978	3	103329105 to 103329131	26	+	TSS region	transcription start site region 30978
Gm43061	3	103332143 to 103334383	2240	+	sense intronic lncRNA gene	predicted gene 43061
Tssr30979	3	103356809 to 103356816	7	+	TSS region	transcription start site region 30979
Tssr34840	3	103364239 to 103364266	27	-	TSS region	transcription start site region 34840
Tssr30980	3	103373764 to 103373765	1	+	TSS region	transcription start site region 30980
Cpgi13637	3	103383230 to 103383500	270		CpG island	CpG island 13637
Tssr34841	3	103384979 to 103384984	5	-	TSS region	transcription start site region 34841
Tssr30981	3	103385174 to 103385191	17	+	TSS region	transcription start site region 30981
Tssr30982	3	103386879 to 103386891	12	+	TSS region	transcription start site region 30982
Tssr30983	3	103386983 to 103387004	21	+	TSS region	transcription start site region 30983