Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:102770233-103080247

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tspan2 3 102734770 to 102772310 37540 + protein coding gene tetraspanin 2
Tssr30944 3 102775104 to 102775111 7 + TSS region transcription start site region 30944
Tshb 3 102775465 to 102782718 7253 - protein coding gene thyroid stimulating hormone, beta subunit
Tssr34831 3 102778326 to 102778342 16 - TSS region transcription start site region 34831
Tssr34832 3 102782670 to 102782675 5 - TSS region transcription start site region 34832
Tssr34833 3 102782708 to 102782715 7 - TSS region transcription start site region 34833
Aec1 3 102782718 to 7521114 -95261604 QTL autoimmune exocrinopathy 1
Gm42681 3 102783179 to 102784789 1610 - antisense lncRNA gene predicted gene 42681
Sycp1 3 102818499 to 102936100 117601 - protein coding gene synaptonemal complex protein 1
Gm42816 3 102830494 to 102830818 324 + pseudogene predicted gene 42816
Gm33952 3 102831590 to 102831997 407 + pseudogene predicted gene, 33952
Gm33866 3 102880780 to 102881068 288 + pseudogene predicted gene, 33866
Tssr34834 3 102925233 to 102925247 14 - TSS region transcription start site region 34834
Tssr991 3 102935252 to 102935256 4 - TSS region transcription start site region 991
Cpgi13628 3 102935314 to 102936250 936 CpG island CpG island 13628
Tssr34835 3 102936093 to 102936107 14 - TSS region transcription start site region 34835
Nr1h5 3 102939658 to 102964133 24475 - protein coding gene nuclear receptor subfamily 1, group H, member 5
Gm22826 3 102951949 to 102952113 164 - snRNA gene predicted gene, 22826
Tssr34836 3 102964124 to 102964137 13 - TSS region transcription start site region 34836
Cpgi13629 3 102995544 to 102996340 796 CpG island CpG island 13629
Tssr30945 3 102995709 to 102995788 79 + TSS region transcription start site region 30945
Sike1 3 102995740 to 103003914 8174 + protein coding gene suppressor of IKBKE 1
Tssr30946 3 102995799 to 102995810 11 + TSS region transcription start site region 30946
Tssr30947 3 102996123 to 102996160 37 + TSS region transcription start site region 30947
Cpgi13630 3 103020189 to 103021529 1340 CpG island CpG island 13630
Tssr34837 3 103020335 to 103020347 12 - TSS region transcription start site region 34837
Csde1 3 103020431 to 103058186 37755 + protein coding gene cold shock domain containing E1, RNA binding
Tssr992 3 103020451 to 103020469 18 - TSS region transcription start site region 992
Tssr30948 3 103020594 to 103020635 41 + TSS region transcription start site region 30948
Tssr34838 3 103020932 to 103020953 21 - TSS region transcription start site region 34838
Tssr30949 3 103028842 to 103028868 26 + TSS region transcription start site region 30949
Tssr34839 3 103028892 to 103028919 27 - TSS region transcription start site region 34839
Tssr30950 3 103028983 to 103029068 85 + TSS region transcription start site region 30950
Tssr30951 3 103029105 to 103029130 25 + TSS region transcription start site region 30951
Tssr30952 3 103030132 to 103030177 45 + TSS region transcription start site region 30952
Tssr30953 3 103043623 to 103043646 23 + TSS region transcription start site region 30953
Tssr30954 3 103049655 to 103049667 12 + TSS region transcription start site region 30954
Tssr30955 3 103056974 to 103057007 33 + TSS region transcription start site region 30955
Cpgi13631 3 103058234 to 103058662 428 CpG island CpG island 13631
Nras 3 103058285 to 103067914 9629 + protein coding gene neuroblastoma ras oncogene
Tssr30956 3 103058302 to 103058352 50 + TSS region transcription start site region 30956
Tssr30957 3 103058353 to 103058365 12 + TSS region transcription start site region 30957
Tssr30958 3 103058709 to 103058742 33 + TSS region transcription start site region 30958
Tssr30959 3 103065043 to 103065057 14 + TSS region transcription start site region 30959
Tssr30960 3 103065372 to 103065394 22 + TSS region transcription start site region 30960
Gm43062 3 103071174 to 103072492 1318 + lincRNA gene predicted gene 43062
Tssr30961 3 103071195 to 103071199 4 + TSS region transcription start site region 30961
Tssr30962 3 103074009 to 103074033 24 + TSS region transcription start site region 30962
Ampd1 3 103074014 to 103099720 25706 + protein coding gene adenosine monophosphate deaminase 1
Tssr30963 3 103074035 to 103074048 13 + TSS region transcription start site region 30963