Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:102743499-103011100

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tspan2 3 102734770 to 102772310 37540 + protein coding gene tetraspanin 2
Tssr30942 3 102748180 to 102748184 4 + TSS region transcription start site region 30942
Tssr30943 3 102760895 to 102760906 11 + TSS region transcription start site region 30943
Tssr30944 3 102775104 to 102775111 7 + TSS region transcription start site region 30944
Tshb 3 102775465 to 102782718 7253 - protein coding gene thyroid stimulating hormone, beta subunit
Tssr34831 3 102778326 to 102778342 16 - TSS region transcription start site region 34831
Tssr34832 3 102782670 to 102782675 5 - TSS region transcription start site region 34832
Tssr34833 3 102782708 to 102782715 7 - TSS region transcription start site region 34833
Aec1 3 102782718 to 7521114 -95261604 QTL autoimmune exocrinopathy 1
Gm42681 3 102783179 to 102784789 1610 - antisense lncRNA gene predicted gene 42681
Sycp1 3 102818499 to 102936100 117601 - protein coding gene synaptonemal complex protein 1
Gm42816 3 102830494 to 102830818 324 + pseudogene predicted gene 42816
Gm33952 3 102831590 to 102831997 407 + pseudogene predicted gene, 33952
Gm33866 3 102880780 to 102881068 288 + pseudogene predicted gene, 33866
Tssr34834 3 102925233 to 102925247 14 - TSS region transcription start site region 34834
Tssr991 3 102935252 to 102935256 4 - TSS region transcription start site region 991
Cpgi13628 3 102935314 to 102936250 936 CpG island CpG island 13628
Tssr34835 3 102936093 to 102936107 14 - TSS region transcription start site region 34835
Nr1h5 3 102939658 to 102964133 24475 - protein coding gene nuclear receptor subfamily 1, group H, member 5
Gm22826 3 102951949 to 102952113 164 - snRNA gene predicted gene, 22826
Tssr34836 3 102964124 to 102964137 13 - TSS region transcription start site region 34836
Cpgi13629 3 102995544 to 102996340 796 CpG island CpG island 13629
Tssr30945 3 102995709 to 102995788 79 + TSS region transcription start site region 30945
Sike1 3 102995740 to 103003914 8174 + protein coding gene suppressor of IKBKE 1
Tssr30946 3 102995799 to 102995810 11 + TSS region transcription start site region 30946
Tssr30947 3 102996123 to 102996160 37 + TSS region transcription start site region 30947