MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:102089615-102182496

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Casq2	3	102086420 to 102146514	60094	+	protein coding gene	calsequestrin 2
Gm43244	3	102129938 to 102131222	1284	+	sense intronic lncRNA gene	predicted gene 43244
4632404M16Rik	3	102134615 to 102137496	2881	+	sense intronic lncRNA gene	RIKEN cDNA 4632404M16 gene
Tssr30922	3	102144164 to 102144175	11	+	TSS region	transcription start site region 30922
Vangl1	3	102153583 to 102204693	51110	-	protein coding gene	VANGL planar cell polarity 1
Tssr34819	3	102165561 to 102165577	16	-	TSS region	transcription start site region 34819
Tssr34820	3	102165894 to 102165909	15	-	TSS region	transcription start site region 34820
Tssr34821	3	102165917 to 102165946	29	-	TSS region	transcription start site region 34821
Tssr34822	3	102166387 to 102166408	21	-	TSS region	transcription start site region 34822
Tssr34823	3	102166435 to 102166448	13	-	TSS region	transcription start site region 34823
Tssr34824	3	102166969 to 102167006	37	-	TSS region	transcription start site region 34824
Tssr34825	3	102167021 to 102167037	16	-	TSS region	transcription start site region 34825
Tssr34826	3	102167547 to 102167572	25	-	TSS region	transcription start site region 34826
Tssr34827	3	102167631 to 102167659	28	-	TSS region	transcription start site region 34827
Tssr34828	3	102167671 to 102167695	24	-	TSS region	transcription start site region 34828
Tssr34829	3	102167696 to 102167726	30	-	TSS region	transcription start site region 34829
Tssr30923	3	102167842 to 102167853	11	+	TSS region	transcription start site region 30923