Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:101588124-101910009

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp1a1 3 101576219 to 101604684 28465 - protein coding gene ATPase, Na+/K+ transporting, alpha 1 polypeptide
Tssr34796 3 101592435 to 101592447 12 - TSS region transcription start site region 34796
Tssr34797 3 101592458 to 101592473 15 - TSS region transcription start site region 34797
Tssr34798 3 101592488 to 101592499 11 - TSS region transcription start site region 34798
Tssr34799 3 101592506 to 101592547 41 - TSS region transcription start site region 34799
Tssr34800 3 101592573 to 101592584 11 - TSS region transcription start site region 34800
Tssr34801 3 101595088 to 101595115 27 - TSS region transcription start site region 34801
Gm42941 3 101595810 to 101597130 1320 - sense intronic lncRNA gene predicted gene 42941
Tssr30908 3 101600611 to 101600633 22 + TSS region transcription start site region 30908
Cpgi13620 3 101603884 to 101605226 1342 CpG island CpG island 13620
Tssr989 3 101604428 to 101604453 25 + TSS region transcription start site region 989
Tssr34802 3 101604539 to 101604552 13 - TSS region transcription start site region 34802
Tssr34803 3 101604580 to 101604629 49 - TSS region transcription start site region 34803
Tssr34804 3 101604649 to 101604654 5 - TSS region transcription start site region 34804
Tssr34805 3 101604655 to 101604689 34 - TSS region transcription start site region 34805
Tssr34806 3 101604693 to 101604715 22 - TSS region transcription start site region 34806
Tssr34807 3 101605168 to 101605190 22 - TSS region transcription start site region 34807
Tssr990 3 101606940 to 101606943 3 + TSS region transcription start site region 990
Gm33215 3 101634049 to 101650797 16748 - lncRNA gene predicted gene, 33215
Tssr30909 3 101634772 to 101634774 2 + TSS region transcription start site region 30909
Gm33265 3 101659087 to 101667301 8214 - lncRNA gene predicted gene, 33265
Tssr30910 3 101667601 to 101667624 23 + TSS region transcription start site region 30910
Gm43135 3 101691789 to 101699632 7843 + lincRNA gene predicted gene 43135
Gm33309 3 101727135 to 101737539 10404 - lncRNA gene predicted gene, 33309
D3Mit191 3 101731586 to 101731734 148 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 191
Gm43134 3 101748124 to 101750009 1885 + lincRNA gene predicted gene 43134
Cpgi13621 3 101806308 to 101806481 173 CpG island CpG island 13621
Mab21l3 3 101813076 to 101836726 23650 - protein coding gene mab-21-like 3
Gm33381 3 101826881 to 101834987 8106 + lncRNA gene predicted gene, 33381
Tssr34808 3 101836146 to 101836177 31 - TSS region transcription start site region 34808
Tssr34809 3 101836181 to 101836210 29 - TSS region transcription start site region 34809
Tssr34810 3 101836227 to 101836237 10 - TSS region transcription start site region 34810
Slc22a15 3 101855776 to 101924453 68677 - protein coding gene solute carrier family 22 (organic anion/cation transporter), member 15