Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:100725459-100996922

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm23465	3	100738452 to 100738713	261	-	unclassified non-coding RNA gene	predicted gene, 23465
Cia5b	3	100747868 to 103837463	3089595		QTL	collagen induced arthritis QTL 5b
D3Mit75	3	100747868 to 100747974	106		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 75
Char4	3	100747974 to 69718176	-31029798		QTL	P. chabaudi malaria resistance QTL 4
Tssr30882	3	100785724 to 100785756	32	+	TSS region	transcription start site region 30882
Gm40107	3	100811539 to 100817753	6214	-	lncRNA gene	predicted gene, 40107
Gm32720	3	100820397 to 100827023	6626	-	lncRNA gene	predicted gene, 32720
Tssr30883	3	100825452 to 100825467	15	+	TSS region	transcription start site region 30883
Vtcn1	3	100825459 to 100896922	71463	+	protein coding gene	V-set domain containing T cell activation inhibitor 1
Gm40108	3	100908937 to 100915220	6283	+	lncRNA gene	predicted gene, 40108
Tssr30884	3	100920775 to 100920783	8	+	TSS region	transcription start site region 30884
Tssr30885	3	100921692 to 100921702	10	+	TSS region	transcription start site region 30885
Cpgi13616	3	100921861 to 100922669	808		CpG island	CpG island 13616
Tssr30886	3	100922436 to 100922473	37	+	TSS region	transcription start site region 30886
Tssr30887	3	100922482 to 100922499	17	+	TSS region	transcription start site region 30887
Trim45	3	100922493 to 100936925	14432	+	protein coding gene	tripartite motif-containing 45
Tssr30888	3	100924928 to 100924946	18	+	TSS region	transcription start site region 30888
Ttf2	3	100938860 to 100969663	30803	-	protein coding gene	transcription termination factor, RNA polymerase II
Gm12488	3	100955441 to 100955939	498	+	pseudogene	predicted gene 12488
Cpgi13617	3	100969293 to 100969894	601		CpG island	CpG island 13617
Tssr34759	3	100969644 to 100969676	32	-	TSS region	transcription start site region 34759
Tssr34760	3	100969679 to 100969684	5	-	TSS region	transcription start site region 34760
Cfsw1	3	100975596 to 100975728	132		QTL	cystic fibrosis survival to weaning 1
D3Mit189	3	100975596 to 100975728	132		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 189
Cd101	3	100993529 to 101029495	35966	-	protein coding gene	CD101 antigen