Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:9884552-10078596

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9230102O04Rik 2 9883041 to 9889540 6499 - protein coding gene RIKEN cDNA 9230102O04 gene
Tssr22571 2 9887730 to 9887744 14 - TSS region transcription start site region 22571
Tssr22572 2 9887747 to 9887769 22 - TSS region transcription start site region 22572
Tssr22573 2 9887775 to 9887795 20 - TSS region transcription start site region 22573
Tssr22574 2 9887824 to 9887842 18 - TSS region transcription start site region 22574
Tssr22575 2 9887952 to 9888000 48 - TSS region transcription start site region 22575
Cpgi11187 2 9888929 to 9890016 1087 CpG island CpG island 11187
Tssr22576 2 9889535 to 9889544 9 - TSS region transcription start site region 22576
Tssr22577 2 9889586 to 9889596 10 - TSS region transcription start site region 22577
Tssr22578 2 9890026 to 9890035 9 - TSS region transcription start site region 22578
Cpgi11188 2 9896014 to 9896384 370 CpG island CpG island 11188
Gm13262 2 9906178 to 9914678 8500 + antisense lncRNA gene predicted gene 13262
Tssr16074 2 9906283 to 9906291 8 + TSS region transcription start site region 16074
Gm31290 2 9918177 to 9922384 4207 + lncRNA gene predicted gene, 31290
Tssr22579 2 9951812 to 9951833 21 - TSS region transcription start site region 22579
Tssr22580 2 9952629 to 9952661 32 - TSS region transcription start site region 22580
D2Mit233 2 9955306 to 9955454 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 233
Gm31200 2 9965785 to 9968453 2668 + pseudogene predicted gene, 31200
Tssr22581 2 10028957 to 10028974 17 - TSS region transcription start site region 22581
Cpgi11189 2 10047596 to 10048876 1280 CpG island CpG island 11189
C630004M23Rik 2 10047838 to 10049519 1681 + unclassified gene RIKEN cDNA C630004M23 gene
Tssr22582 2 10048580 to 10048621 41 - TSS region transcription start site region 22582
Taf3 2 10048596 to 9914552 -134044 - protein coding gene TATA-box binding protein associated factor 3
Atp5c1 2 10056030 to 10080518 24488 - protein coding gene ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
Tssr22583 2 10063534 to 10063549 15 - TSS region transcription start site region 22583
Tssr22584 2 10064427 to 10064453 26 - TSS region transcription start site region 22584
Tssr22585 2 10068666 to 10068677 11 - TSS region transcription start site region 22585
Gm23608 2 10075653 to 10075780 127 - snoRNA gene predicted gene, 23608