Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:9881812-10021833

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930412O13Rik 2 9881252 to 9883921 2669 + protein coding gene RIKEN cDNA 4930412O13 gene
Tssr22568 2 9881962 to 9881985 23 - TSS region transcription start site region 22568
Cpgi11186 2 9882087 to 9883314 1227 CpG island CpG island 11186
Tssr16065 2 9882123 to 9882134 11 + TSS region transcription start site region 16065
Tssr16066 2 9882144 to 9882153 9 + TSS region transcription start site region 16066
Tssr16067 2 9882196 to 9882208 12 + TSS region transcription start site region 16067
Tssr16068 2 9882216 to 9882227 11 + TSS region transcription start site region 16068
Tssr16069 2 9882502 to 9882546 44 + TSS region transcription start site region 16069
Tssr16070 2 9882622 to 9882646 24 + TSS region transcription start site region 16070
Tssr400 2 9882652 to 9882661 9 + TSS region transcription start site region 400
9230102O04Rik 2 9883041 to 9889540 6499 - protein coding gene RIKEN cDNA 9230102O04 gene
Tssr22569 2 9884217 to 9884230 13 - TSS region transcription start site region 22569
Tssr22570 2 9884337 to 9884345 8 - TSS region transcription start site region 22570
Tssr16071 2 9884457 to 9884475 18 + TSS region transcription start site region 16071
Tssr16072 2 9884486 to 9884497 11 + TSS region transcription start site region 16072
Tssr16073 2 9884522 to 9884533 11 + TSS region transcription start site region 16073
Tssr22571 2 9887730 to 9887744 14 - TSS region transcription start site region 22571
Tssr22572 2 9887747 to 9887769 22 - TSS region transcription start site region 22572
Tssr22573 2 9887775 to 9887795 20 - TSS region transcription start site region 22573
Tssr22574 2 9887824 to 9887842 18 - TSS region transcription start site region 22574
Tssr22575 2 9887952 to 9888000 48 - TSS region transcription start site region 22575
Cpgi11187 2 9888929 to 9890016 1087 CpG island CpG island 11187
Tssr22576 2 9889535 to 9889544 9 - TSS region transcription start site region 22576
Tssr22577 2 9889586 to 9889596 10 - TSS region transcription start site region 22577
Tssr22578 2 9890026 to 9890035 9 - TSS region transcription start site region 22578
Cpgi11188 2 9896014 to 9896384 370 CpG island CpG island 11188
Gm13262 2 9906178 to 9914678 8500 + antisense lncRNA gene predicted gene 13262
Tssr16074 2 9906283 to 9906291 8 + TSS region transcription start site region 16074
Gm31290 2 9918177 to 9922384 4207 + lncRNA gene predicted gene, 31290
Tssr22579 2 9951812 to 9951833 21 - TSS region transcription start site region 22579
Tssr22580 2 9952629 to 9952661 32 - TSS region transcription start site region 22580
D2Mit233 2 9955306 to 9955454 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 233
Gm31200 2 9965785 to 9968453 2668 + pseudogene predicted gene, 31200
Taf3 2 10048596 to 9914552 -134044 - protein coding gene TATA-box binding protein associated factor 3