Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:9852078-9883612

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gata3 2 9857078 to 9878612 21534 - protein coding gene GATA binding protein 3
Tssr22543 2 9857430 to 9857435 5 - TSS region transcription start site region 22543
Tssr22544 2 9857571 to 9857583 12 - TSS region transcription start site region 22544
Tssr22545 2 9863313 to 9863316 3 - TSS region transcription start site region 22545
Tssr22546 2 9863560 to 9863577 17 - TSS region transcription start site region 22546
Tssr22547 2 9867553 to 9867557 4 - TSS region transcription start site region 22547
Tssr22548 2 9868834 to 9868845 11 - TSS region transcription start site region 22548
Tssr22549 2 9868860 to 9868871 11 - TSS region transcription start site region 22549
Tssr22550 2 9868873 to 9868885 12 - TSS region transcription start site region 22550
Tssr22551 2 9869404 to 9869413 9 - TSS region transcription start site region 22551
Tssr16060 2 9869617 to 9869622 5 + TSS region transcription start site region 16060
Tssr22552 2 9869803 to 9869827 24 - TSS region transcription start site region 22552
Cpgi11182 2 9874396 to 9875116 720 CpG island CpG island 11182
Tssr22553 2 9875390 to 9875404 14 - TSS region transcription start site region 22553
Tssr16061 2 9876114 to 9876137 23 + TSS region transcription start site region 16061
Cpgi11183 2 9876976 to 9877718 742 CpG island CpG island 11183
Gm13256 2 9877256 to 9878869 1613 + antisense lncRNA gene predicted gene 13256
Tssr22554 2 9877443 to 9877459 16 - TSS region transcription start site region 22554
Tssr22555 2 9877836 to 9877850 14 - TSS region transcription start site region 22555
Tssr22556 2 9877884 to 9877887 3 - TSS region transcription start site region 22556
Tssr22557 2 9877986 to 9878016 30 - TSS region transcription start site region 22557
Cpgi11184 2 9878062 to 9879780 1718 CpG island CpG island 11184
Tssr22558 2 9878155 to 9878194 39 - TSS region transcription start site region 22558
Tssr22559 2 9878360 to 9878369 9 - TSS region transcription start site region 22559
Tssr22560 2 9878438 to 9878449 11 - TSS region transcription start site region 22560
Tssr22561 2 9878467 to 9878481 14 - TSS region transcription start site region 22561
Tssr22562 2 9878580 to 9878607 27 - TSS region transcription start site region 22562
Tssr22563 2 9879537 to 9879549 12 - TSS region transcription start site region 22563
Tssr22564 2 9879563 to 9879586 23 - TSS region transcription start site region 22564
Tssr22565 2 9879589 to 9879611 22 - TSS region transcription start site region 22565
Tssr16062 2 9879747 to 9879764 17 + TSS region transcription start site region 16062
Tssr16063 2 9880453 to 9880483 30 + TSS region transcription start site region 16063
Tssr22566 2 9881043 to 9881050 7 - TSS region transcription start site region 22566
Cpgi11185 2 9881071 to 9881645 574 CpG island CpG island 11185
Tssr22567 2 9881120 to 9881155 35 - TSS region transcription start site region 22567
4930412O13Rik 2 9881252 to 9883921 2669 + protein coding gene RIKEN cDNA 4930412O13 gene
Tssr16064 2 9881503 to 9881512 9 + TSS region transcription start site region 16064
Tssr22568 2 9881962 to 9881985 23 - TSS region transcription start site region 22568
Cpgi11186 2 9882087 to 9883314 1227 CpG island CpG island 11186
Tssr16065 2 9882123 to 9882134 11 + TSS region transcription start site region 16065
Tssr16066 2 9882144 to 9882153 9 + TSS region transcription start site region 16066
Tssr16067 2 9882196 to 9882208 12 + TSS region transcription start site region 16067
Tssr16068 2 9882216 to 9882227 11 + TSS region transcription start site region 16068
Tssr16069 2 9882502 to 9882546 44 + TSS region transcription start site region 16069
Tssr16070 2 9882622 to 9882646 24 + TSS region transcription start site region 16070
Tssr400 2 9882652 to 9882661 9 + TSS region transcription start site region 400
9230102O04Rik 2 9883041 to 9889540 6499 - protein coding gene RIKEN cDNA 9230102O04 gene