Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:96178169-97771666

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr19006 2 96317751 to 96317781 30 + TSS region transcription start site region 19006
Tssr19007 2 96317783 to 96317805 22 + TSS region transcription start site region 19007
Tssr19008 2 96317820 to 96317831 11 + TSS region transcription start site region 19008
Tssr19009 2 96317935 to 96317947 12 + TSS region transcription start site region 19009
Tssr19010 2 96318014 to 96318057 43 + TSS region transcription start site region 19010
Tssr19011 2 96318073 to 96318084 11 + TSS region transcription start site region 19011
Lrrc4c 2 96318169 to 97631666 1313497 + protein coding gene leucine rich repeat containing 4C
Tssr19012 2 96318359 to 96318403 44 + TSS region transcription start site region 19012
Tssr19013 2 96341075 to 96341092 17 + TSS region transcription start site region 19013
B230308P20Rik 2 96476481 to 96478400 1919 unclassified gene RIKEN cDNA B230308P20 gene
Tssr19014 2 96834778 to 96834780 2 + TSS region transcription start site region 19014
4930445B16Rik 2 96987018 to 97083561 96543 - lincRNA gene RIKEN cDNA 4930445B16 gene
Gm17075 2 96999640 to 97000266 626 + pseudogene predicted gene 17075
Gm17076 2 97039912 to 97041300 1388 + pseudogene predicted gene 17076
C230086H14Rik 2 97108430 to 97110411 1981 unclassified gene RIKEN cDNA C230086H14 gene
Gm22957 2 97117414 to 97117536 122 + snoRNA gene predicted gene, 22957
Tssr19015 2 97125119 to 97125122 3 + TSS region transcription start site region 19015
Gm22313 2 97237818 to 97237946 128 + snoRNA gene predicted gene, 22313
Gm23317 2 97272211 to 97272339 128 - snoRNA gene predicted gene, 23317
Tssr19016 2 97466447 to 97466485 38 + TSS region transcription start site region 19016
Cpgi11965 2 97466567 to 97467145 578 CpG island CpG island 11965
Tssr19017 2 97467476 to 97467505 29 + TSS region transcription start site region 19017
Tssr19018 2 97467539 to 97467559 20 + TSS region transcription start site region 19018
Tssr19019 2 97467575 to 97467586 11 + TSS region transcription start site region 19019
Tssr19020 2 97467686 to 97467699 13 + TSS region transcription start site region 19020
Tssr19021 2 97480114 to 97480120 6 + TSS region transcription start site region 19021
Tssr19022 2 97497356 to 97497358 2 + TSS region transcription start site region 19022
Tssr19023 2 97502512 to 97502516 4 + TSS region transcription start site region 19023
Tssr19024 2 97526136 to 97526140 4 + TSS region transcription start site region 19024
D2Mit130 2 97586144 to 97586359 215 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 130
Gm44320 2 97626967 to 97627052 85 - miRNA gene predicted gene, 44320
Tssr19025 2 97630756 to 97630768 12 + TSS region transcription start site region 19025
Tssr19026 2 97630797 to 97630818 21 + TSS region transcription start site region 19026
Tssr19027 2 97630827 to 97630836 9 + TSS region transcription start site region 19027
Mpaps1 2 112284851 to 97198212 -15086639 QTL microphthalmia anophthalmia susceptibility 1