Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:94298081-94578161

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttc17 2 94300767 to 94406689 105922 - protein coding gene tetratricopeptide repeat domain 17
Tssr25326 2 94332900 to 94332911 11 - TSS region transcription start site region 25326
Itpa-ps1 2 94384502 to 94385098 596 - pseudogene inosine triphosphatase (nucleoside triphosphate pyrophosphatase) pseudogene 1
Tssr25327 2 94400412 to 94400424 12 - TSS region transcription start site region 25327
Tssr25328 2 94404985 to 94405002 17 - TSS region transcription start site region 25328
Cpgi11962 2 94406014 to 94406851 837 CpG island CpG island 11962
Tssr25329 2 94406647 to 94406696 49 - TSS region transcription start site region 25329
2810002D19Rik 2 94406707 to 94411682 4975 + lncRNA gene RIKEN cDNA 2810002D19 gene
Tssr19003 2 94406719 to 94406762 43 + TSS region transcription start site region 19003
Tssr19004 2 94406763 to 94406808 45 + TSS region transcription start site region 19004
Api5 2 94411682 to 94438136 26454 - protein coding gene apoptosis inhibitor 5
Tssr571 2 94412660 to 94412675 15 - TSS region transcription start site region 571
Cpgi11963 2 94437205 to 94438549 1344 CpG island CpG island 11963
Tssr25330 2 94438061 to 94438075 14 - TSS region transcription start site region 25330
Tssr25331 2 94438081 to 94438161 80 - TSS region transcription start site region 25331
Tssr25332 2 94438162 to 94438171 9 - TSS region transcription start site region 25332
D2Mit221 2 94438799 to 94438928 129 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 221
Cpgi11964 2 94479953 to 94480209 256 CpG island CpG island 11964
Gm46726 2 94515023 to 94526365 11342 + pseudogene predicted gene, 46726
Gm44461 2 94537987 to 94538069 82 - miRNA gene predicted gene, 44461