MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:93968729-94068850

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm27027	2	93956817 to 93996354	39537	-	protein coding gene	predicted gene, 27027
Cpgi11954	2	93976127 to 93976840	713		CpG island	CpG island 11954
Alkbh3os1	2	93980034 to 93983575	3541	+	antisense lncRNA gene	alkB homolog 3, opposite strand 1
Alkbh3	2	93980624 to 94010823	30199	-	protein coding gene	alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase
Tssr25307	2	93984788 to 93984795	7	-	TSS region	transcription start site region 25307
Tssr25308	2	93984811 to 93984845	34	-	TSS region	transcription start site region 25308
Tssr25309	2	93984857 to 93984865	8	-	TSS region	transcription start site region 25309
Cpgi11955	2	94010341 to 94011203	862		CpG island	CpG island 11955
Tssr25310	2	94010718 to 94010727	9	-	TSS region	transcription start site region 25310
Tssr25311	2	94010729 to 94010764	35	-	TSS region	transcription start site region 25311
Tssr25312	2	94010816 to 94010823	7	-	TSS region	transcription start site region 25312
D2Mit386	2	94018729 to 94018850	121		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 386
Hsd17b12	2	94032697 to 94157909	125212	-	protein coding gene	hydroxysteroid (17-beta) dehydrogenase 12
D2Mit303	2	94054365 to 94054460	95		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 303
Tssr25313	2	94066702 to 94066711	9	-	TSS region	transcription start site region 25313
Tssr25314	2	94066747 to 94066755	8	-	TSS region	transcription start site region 25314
Tssr25315	2	94066798 to 94066816	18	-	TSS region	transcription start site region 25315