Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:93549621-93939626

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Orgwq2 2 3886089 to 93591306 89705217 QTL organ weight QTL 2
Gm10803 2 93560568 to 93564361 3793 + protein coding gene predicted gene 10803
Cpgi11946 2 93580304 to 93580718 414 CpG island CpG island 11946
Gm33061 2 93580471 to 93582712 2241 + lncRNA gene predicted gene, 33061
Cplaq7 2 93591138 to 93591306 168 QTL circadian period of locomotor activity 7
D2Nds1 2 93591138 to 93591306 168 DNA segment DNA segment, Chr 2, Nuffield Department of Surgery 1
Tssr18999 2 93600093 to 93600114 21 + TSS region transcription start site region 18999
Tssr19000 2 93642269 to 93642277 8 + TSS region transcription start site region 19000
Tssr19001 2 93642279 to 93642294 15 + TSS region transcription start site region 19001
Tssr19002 2 93642307 to 93642334 27 + TSS region transcription start site region 19002
Alx4 2 93642434 to 93681341 38907 + protein coding gene aristaless-like homeobox 4
Cpgi11947 2 93642521 to 93643854 1333 CpG island CpG island 11947
Cpgi11948 2 93645968 to 93646368 400 CpG island CpG island 11948
Cpgi11949 2 93646969 to 93647780 811 CpG island CpG island 11949
Ext2 2 93695631 to 93822583 126952 - protein coding gene exostoses (multiple) 2
Gm39883 2 93710952 to 93721441 10489 - lncRNA gene predicted gene, 39883
Tssr25298 2 93744621 to 93744626 5 - TSS region transcription start site region 25298
Gm13818 2 93794570 to 93795080 510 + pseudogene predicted gene 13818
Cpgi11950 2 93813470 to 93813692 222 CpG island CpG island 11950
Cpgi11951 2 93822023 to 93822797 774 CpG island CpG island 11951
Tssr25299 2 93822523 to 93822534 11 - TSS region transcription start site region 25299
Tssr25300 2 93822537 to 93822581 44 - TSS region transcription start site region 25300
Accs 2 93833467 to 93849943 16476 - protein coding gene 1-aminocyclopropane-1-carboxylate synthase (non-functional)
Cpgi11952 2 93849449 to 93849930 481 CpG island CpG island 11952
Tssr25301 2 93849778 to 93849836 58 - TSS region transcription start site region 25301
Tssr25302 2 93849921 to 93849980 59 - TSS region transcription start site region 25302
Accsl 2 93855361 to 93869157 13796 - protein coding gene 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
Tssr25303 2 93869101 to 93869103 2 - TSS region transcription start site region 25303
Tssr25304 2 93869359 to 93869375 16 - TSS region transcription start site region 25304