Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:9323989-9864002

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D2Dcr44 2 9336209 to 9336314 105 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 44
D2Mit359 2 9348540 to 9348645 105 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 359
Gm13219 2 9352431 to 9447676 95245 + lincRNA gene predicted gene 13219
Tssr16049 2 9352468 to 9352480 12 + TSS region transcription start site region 16049
Tssr16050 2 9352481 to 9352499 18 + TSS region transcription start site region 16050
Tssr16051 2 9368462 to 9368511 49 + TSS region transcription start site region 16051
Tssr16052 2 9369038 to 9369053 15 + TSS region transcription start site region 16052
Tssr16053 2 9369064 to 9369075 11 + TSS region transcription start site region 16053
Tssr22533 2 9375933 to 9375937 4 - TSS region transcription start site region 22533
Tssr16054 2 9376280 to 9376325 45 + TSS region transcription start site region 16054
Tssr22534 2 9377953 to 9377964 11 - TSS region transcription start site region 22534
Tssr16055 2 9378241 to 9378261 20 + TSS region transcription start site region 16055
Tssr22535 2 9520132 to 9520135 3 - TSS region transcription start site region 22535
D2Mit5 2 9524642 to 9524778 136 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 5
Sluc16 2 9524642 to 9524778 136 QTL susceptibility to lung cancer 16
Gm13220 2 9575836 to 9576343 507 + pseudogene predicted gene 13220
Gm13218 2 9591218 to 9592938 1720 - lincRNA gene predicted gene 13218
Tssr22536 2 9593808 to 9593828 20 - TSS region transcription start site region 22536
Tssr22537 2 9593989 to 9594002 13 - TSS region transcription start site region 22537
Tssr22538 2 9594061 to 9594086 25 - TSS region transcription start site region 22538
Tssr22539 2 9594132 to 9594144 12 - TSS region transcription start site region 22539
Tssr22540 2 9594168 to 9594179 11 - TSS region transcription start site region 22540
Tssr16056 2 9595626 to 9595634 8 + TSS region transcription start site region 16056
D2Dcr45 2 9602690 to 9602864 174 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 45
D2Dcr131 2 9602710 to 9602826 116 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 131
D2Mit314 2 9610521 to 9610707 186 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 314
D2Mit314S 2 9610688 to 9610816 128 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-314S
Gm37866 2 9630646 to 9631341 695 - unclassified gene predicted gene, 37866
Tssr16057 2 9681793 to 9681804 11 + TSS region transcription start site region 16057
Tssr16058 2 9681807 to 9681818 11 + TSS region transcription start site region 16058
Tssr22541 2 9691629 to 9691634 5 - TSS region transcription start site region 22541
Tssr16059 2 9693726 to 9693730 4 + TSS region transcription start site region 16059
4930554D03Rik 2 9830297 to 9831242 945 unclassified gene RIKEN cDNA 4930554D03 gene
Tssr22542 2 9834217 to 9834223 6 - TSS region transcription start site region 22542
Gata3 2 9857078 to 9878612 21534 - protein coding gene GATA binding protein 3
Tssr22543 2 9857430 to 9857435 5 - TSS region transcription start site region 22543
Tssr22544 2 9857571 to 9857583 12 - TSS region transcription start site region 22544
Tssr22545 2 9863313 to 9863316 3 - TSS region transcription start site region 22545
Tssr22546 2 9863560 to 9863577 17 - TSS region transcription start site region 22546
Opfaq1 2 27132630 to 9671880 -17460750 QTL open field activity QTL 1