MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:92855080-92975115

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm13791	2	92856167 to 92913663	57496	-	lncRNA gene	predicted gene 13791
Gm13792	2	92872887 to 92873309	422	-	pseudogene	predicted gene 13792
Cpgi11936	2	92914856 to 92915478	622		CpG island	CpG island 11936
Tssr18965	2	92915051 to 92915066	15	+	TSS region	transcription start site region 18965
Tssr570	2	92915068 to 92915071	3	+	TSS region	transcription start site region 570
Tssr18966	2	92915080 to 92915115	35	+	TSS region	transcription start site region 18966
Syt13	2	92915101 to 92956051	40950	+	protein coding gene	synaptotagmin XIII
Tssr18967	2	92915122 to 92915127	5	+	TSS region	transcription start site region 18967
Tssr18968	2	92915131 to 92915142	11	+	TSS region	transcription start site region 18968
D2Mit186	2	92929475 to 92929615	140		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 186
Tssr18969	2	92946070 to 92946107	37	+	TSS region	transcription start site region 18969
Tssr18970	2	92952126 to 92952131	5	+	TSS region	transcription start site region 18970
Cpgi11937	2	92953481 to 92953709	228		CpG island	CpG island 11937
Tssr18971	2	92954477 to 92954486	9	+	TSS region	transcription start site region 18971
Tssr18972	2	92954567 to 92954578	11	+	TSS region	transcription start site region 18972
Tssr25271	2	92970683 to 92970711	28	-	TSS region	transcription start site region 25271
Gm29694	2	92972081 to 92974186	2105	-	pseudogene	predicted gene, 29694
Cpgi11938	2	92973248 to 92974156	908		CpG island	CpG island 11938
Prdm11	2	92974906 to 93046144	71238	-	protein coding gene	PR domain containing 11