Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:92582230-92919208

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D2Mit253 2 92590957 to 92591097 140 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 253
Mir7221 2 92592206 to 92592277 71 + miRNA gene microRNA 7221
Mir7222 2 92594602 to 92594676 74 + miRNA gene microRNA 7222
Cpgi11935 2 92598948 to 92600710 1762 CpG island CpG island 11935
Tssr18954 2 92599671 to 92599724 53 + TSS region transcription start site region 18954
Chst1 2 92599707 to 92615250 15543 + protein coding gene carbohydrate sulfotransferase 1
Tssr18955 2 92600070 to 92600096 26 + TSS region transcription start site region 18955
Tssr18956 2 92608307 to 92608316 9 + TSS region transcription start site region 18956
Tssr18957 2 92608323 to 92608333 10 + TSS region transcription start site region 18957
Tssr18958 2 92608336 to 92608352 16 + TSS region transcription start site region 18958
Tssr18959 2 92609490 to 92609498 8 + TSS region transcription start site region 18959
Tssr18960 2 92609500 to 92609516 16 + TSS region transcription start site region 18960
Tssr18961 2 92609541 to 92609560 19 + TSS region transcription start site region 18961
Tssr18962 2 92609567 to 92609588 21 + TSS region transcription start site region 18962
Tssr18963 2 92609593 to 92609604 11 + TSS region transcription start site region 18963
D2Mit479 2 92624436 to 92624572 136 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 479
D2Mit41 2 92637608 to 92637720 112 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 41
Gm13816 2 92742230 to 92759208 16978 + lincRNA gene predicted gene 13816
Gm39880 2 92779422 to 92848169 68747 + lncRNA gene predicted gene, 39880
Gm32413 2 92806921 to 92811719 4798 + lncRNA gene predicted gene, 32413
Tssr18964 2 92848718 to 92848723 5 + TSS region transcription start site region 18964
Gm13791 2 92856167 to 92913663 57496 - lncRNA gene predicted gene 13791
Gm13792 2 92872887 to 92873309 422 - pseudogene predicted gene 13792
Cpgi11936 2 92914856 to 92915478 622 CpG island CpG island 11936
Tssr18965 2 92915051 to 92915066 15 + TSS region transcription start site region 18965
Tssr570 2 92915068 to 92915071 3 + TSS region transcription start site region 570
Tssr18966 2 92915080 to 92915115 35 + TSS region transcription start site region 18966
Syt13 2 92915101 to 92956051 40950 + protein coding gene synaptotagmin XIII
Tssr18967 2 92915122 to 92915127 5 + TSS region transcription start site region 18967
Tssr18968 2 92915131 to 92915142 11 + TSS region transcription start site region 18968