Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:92389783-92529797

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mapk8ip1 2 92383676 to 92401263 17587 - protein coding gene mitogen-activated protein kinase 8 interacting protein 1
Cpgi11930 2 92392104 to 92392582 478 CpG island CpG island 11930
Tssr25254 2 92392335 to 92392396 61 - TSS region transcription start site region 25254
Tssr25255 2 92392441 to 92392494 53 - TSS region transcription start site region 25255
Tssr25256 2 92392497 to 92392523 26 - TSS region transcription start site region 25256
Tssr25257 2 92392634 to 92392654 20 - TSS region transcription start site region 25257
Cpgi11931 2 92400472 to 92401732 1260 CpG island CpG island 11931
Tssr25258 2 92401155 to 92401180 25 - TSS region transcription start site region 25258
Tssr25259 2 92401237 to 92401352 115 - TSS region transcription start site region 25259
Cry2 2 92403646 to 92434043 30397 - protein coding gene cryptochrome 2 (photolyase-like)
D930015M05Rik 2 92408892 to 92432308 23416 + lncRNA gene RIKEN cDNA D930015M05 gene
Tssr18947 2 92422859 to 92422893 34 + TSS region transcription start site region 18947
D2Mit302 2 92431135 to 92431289 154 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 302
Cpgi11932 2 92433468 to 92434477 1009 CpG island CpG island 11932
Tssr25260 2 92434027 to 92434053 26 - TSS region transcription start site region 25260
Tssr25261 2 92434451 to 92434454 3 - TSS region transcription start site region 25261
Tssr18948 2 92442112 to 92442117 5 + TSS region transcription start site region 18948
Slc35c1 2 92452764 to 92460518 7754 - protein coding gene solute carrier family 35, member C1
Gm4026 2 92452766 to 92460934 8168 protein coding gene predicted gene 4026
Cpgi11933 2 92458623 to 92460719 2096 CpG island CpG island 11933
Tssr25262 2 92458881 to 92458907 26 - TSS region transcription start site region 25262
Tssr25263 2 92459267 to 92459313 46 - TSS region transcription start site region 25263
Tssr25264 2 92459589 to 92459602 13 - TSS region transcription start site region 25264
Tssr25265 2 92459711 to 92459781 70 - TSS region transcription start site region 25265
Tssr25266 2 92459783 to 92459797 14 - TSS region transcription start site region 25266
Tssr25267 2 92460449 to 92460524 75 - TSS region transcription start site region 25267
Tssr18949 2 92483833 to 92483876 43 + TSS region transcription start site region 18949
Gm13814 2 92483926 to 92529809 45883 + lincRNA gene predicted gene 13814
Cpgi11934 2 92529240 to 92529619 379 CpG island CpG island 11934
Gm13817 2 92529694 to 92540980 11286 - lincRNA gene predicted gene 13817