Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:92338829-92439609

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Phf21a 2 92183745 to 92364667 180922 + protein coding gene PHD finger protein 21A
Tssr18942 2 92344583 to 92344595 12 + TSS region transcription start site region 18942
Large2 2 92365046 to 92371755 6709 - protein coding gene LARGE xylosyl- and glucuronyltransferase 2
Cpgi11927 2 92370413 to 92371224 811 CpG island CpG island 11927
Tssr25249 2 92370968 to 92370992 24 - TSS region transcription start site region 25249
Tssr25250 2 92370999 to 92371036 37 - TSS region transcription start site region 25250
Tssr25251 2 92371039 to 92371062 23 - TSS region transcription start site region 25251
Cpgi11928 2 92374489 to 92375889 1400 CpG island CpG island 11928
Pex16 2 92374676 to 92381217 6541 + protein coding gene peroxisomal biogenesis factor 16
Tssr18943 2 92375458 to 92375561 103 + TSS region transcription start site region 18943
Tssr18944 2 92375704 to 92375743 39 + TSS region transcription start site region 18944
Tssr568 2 92375766 to 92375777 11 + TSS region transcription start site region 568
Tssr18945 2 92382911 to 92382924 13 + TSS region transcription start site region 18945
1700029I15Rik 2 92382918 to 92383603 685 + protein coding gene RIKEN cDNA 1700029I15 gene
Tssr18946 2 92382932 to 92382941 9 + TSS region transcription start site region 18946
Mapk8ip1 2 92383676 to 92401263 17587 - protein coding gene mitogen-activated protein kinase 8 interacting protein 1
Mir7000 2 92387384 to 92387446 62 - miRNA gene microRNA 7000
Cpgi11929 2 92388829 to 92389609 780 CpG island CpG island 11929
Tssr25252 2 92389012 to 92389019 7 - TSS region transcription start site region 25252
Tssr25253 2 92389248 to 92389335 87 - TSS region transcription start site region 25253
Cpgi11930 2 92392104 to 92392582 478 CpG island CpG island 11930
Tssr25254 2 92392335 to 92392396 61 - TSS region transcription start site region 25254
Tssr25255 2 92392441 to 92392494 53 - TSS region transcription start site region 25255
Tssr25256 2 92392497 to 92392523 26 - TSS region transcription start site region 25256
Tssr25257 2 92392634 to 92392654 20 - TSS region transcription start site region 25257
Cpgi11931 2 92400472 to 92401732 1260 CpG island CpG island 11931
Tssr25258 2 92401155 to 92401180 25 - TSS region transcription start site region 25258
Tssr25259 2 92401237 to 92401352 115 - TSS region transcription start site region 25259
Cry2 2 92403646 to 92434043 30397 - protein coding gene cryptochrome 2 (photolyase-like)
D930015M05Rik 2 92408892 to 92432308 23416 + lncRNA gene RIKEN cDNA D930015M05 gene
Tssr18947 2 92422859 to 92422893 34 + TSS region transcription start site region 18947
D2Mit302 2 92431135 to 92431289 154 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 302
Cpgi11932 2 92433468 to 92434477 1009 CpG island CpG island 11932
Tssr25260 2 92434027 to 92434053 26 - TSS region transcription start site region 25260
Tssr25261 2 92434451 to 92434454 3 - TSS region transcription start site region 25261