Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:91924143-92124222

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi11914 2 91921406 to 91924272 2866 CpG island CpG island 11914
Chrm4 2 91927249 to 91928688 1439 + protein coding gene cholinergic receptor, muscarinic 4
Cpgi11915 2 91927900 to 91928763 863 CpG island CpG island 11915
Tssr18929 2 91929672 to 91929676 4 + TSS region transcription start site region 18929
Mdk 2 91929805 to 91932297 2492 - protein coding gene midkine
Tssr25211 2 91929868 to 91929890 22 - TSS region transcription start site region 25211
Tssr25212 2 91929892 to 91929904 12 - TSS region transcription start site region 25212
Tssr25213 2 91930919 to 91930938 19 - TSS region transcription start site region 25213
Cpgi11916 2 91931054 to 91932185 1131 CpG island CpG island 11916
Tssr25214 2 91931451 to 91931534 83 - TSS region transcription start site region 25214
Tssr25215 2 91931661 to 91931670 9 - TSS region transcription start site region 25215
Tssr25216 2 91931675 to 91931686 11 - TSS region transcription start site region 25216
Tssr25217 2 91931696 to 91931723 27 - TSS region transcription start site region 25217
Tssr25218 2 91931728 to 91931772 44 - TSS region transcription start site region 25218
Tssr25219 2 91931774 to 91931793 19 - TSS region transcription start site region 25219
D2Mit1007 2 91931869 to 91931971 102 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 1007
Tssr25220 2 91931955 to 91931989 34 - TSS region transcription start site region 25220
D2Mit1008 2 91931964 to 91932132 168 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 1008
Tssr25221 2 91931994 to 91932008 14 - TSS region transcription start site region 25221
Gm39876 2 91932217 to 91932989 772 + lncRNA gene predicted gene, 39876
Dgkz 2 91932824 to 91975864 43040 - protein coding gene diacylglycerol kinase zeta
Tssr25222 2 91935794 to 91935821 27 - TSS region transcription start site region 25222
Tssr25223 2 91940297 to 91940336 39 - TSS region transcription start site region 25223
D2Mit45 2 91943041 to 91943158 117 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 45
D2Dcr50 2 91943071 to 91943203 132 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 50
Tssr25224 2 91944819 to 91944839 20 - TSS region transcription start site region 25224
Mir6999 2 91944870 to 91944930 60 - miRNA gene microRNA 6999
Gm9821 2 91945703 to 91947655 1952 + protein coding gene predicted gene 9821
Tssr25225 2 91947477 to 91947492 15 - TSS region transcription start site region 25225
Tssr25226 2 91950288 to 91950359 71 - TSS region transcription start site region 25226
Tssr25227 2 91950386 to 91950406 20 - TSS region transcription start site region 25227
Tssr25228 2 91962491 to 91962494 3 - TSS region transcription start site region 25228
Cpgi11917 2 91962943 to 91964212 1269 CpG island CpG island 11917
Tssr25229 2 91963507 to 91963694 187 - TSS region transcription start site region 25229
Tssr25230 2 91963704 to 91963713 9 - TSS region transcription start site region 25230
Tssr25231 2 91963729 to 91963740 11 - TSS region transcription start site region 25231
Tssr25232 2 91963746 to 91963760 14 - TSS region transcription start site region 25232
Tssr18930 2 91963854 to 91963894 40 + TSS region transcription start site region 18930
Cpgi11918 2 91965387 to 91965738 351 CpG island CpG island 11918
Tssr25233 2 91965506 to 91965525 19 - TSS region transcription start site region 25233
Tssr25234 2 91965529 to 91965560 31 - TSS region transcription start site region 25234
Tssr25235 2 91965565 to 91965596 31 - TSS region transcription start site region 25235
Tssr25236 2 91965721 to 91965738 17 - TSS region transcription start site region 25236
Cpgi11919 2 91975229 to 91976479 1250 CpG island CpG island 11919
Tssr25237 2 91976308 to 91976346 38 - TSS region transcription start site region 25237
Creb3l1 2 91982328 to 92024170 41842 - protein coding gene cAMP responsive element binding protein 3-like 1
Tssr25238 2 91982688 to 91982750 62 - TSS region transcription start site region 25238
Tssr25239 2 91982798 to 91982817 19 - TSS region transcription start site region 25239
Tssr25240 2 91982838 to 91982858 20 - TSS region transcription start site region 25240
Tssr25241 2 91982910 to 91982924 14 - TSS region transcription start site region 25241
Tssr25242 2 91986220 to 91986242 22 - TSS region transcription start site region 25242
Tssr25243 2 91986281 to 91986289 8 - TSS region transcription start site region 25243
Tssr25244 2 91991957 to 91991982 25 - TSS region transcription start site region 25244
Tssr25245 2 92001892 to 92001904 12 - TSS region transcription start site region 25245
Gm31473 2 92005192 to 92045252 40060 + lncRNA gene predicted gene, 31473
Cpgi11920 2 92008235 to 92008914 679 CpG island CpG island 11920
Cpgi11921 2 92023598 to 92024620 1022 CpG island CpG island 11921
Tssr25246 2 92024143 to 92024222 79 - TSS region transcription start site region 25246
Tssr25247 2 92024292 to 92024335 43 - TSS region transcription start site region 25247
Tssr567 2 92024499 to 92024502 3 - TSS region transcription start site region 567
Tssr25248 2 92024504 to 92024529 25 - TSS region transcription start site region 25248
D2Mit15 2 92035835 to 92035976 141 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 15
Gm13780 2 92043373 to 92096042 52669 - lincRNA gene predicted gene 13780
2900072N19Rik 2 92054989 to 92059369 4380 - lincRNA gene RIKEN cDNA 2900072N19 gene
Cpgi11922 2 92055389 to 92055814 425 CpG island CpG island 11922
Cpgi11923 2 92058462 to 92059026 564 CpG island CpG island 11923
Tssr18931 2 92058709 to 92058729 20 + TSS region transcription start site region 18931
Tssr18932 2 92058730 to 92058778 48 + TSS region transcription start site region 18932
Cpgi11924 2 92059443 to 92060308 865 CpG island CpG island 11924