Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:91700134-91948849

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atg13 2 91674618 to 91710576 35958 - protein coding gene autophagy related 13
Tssr25205 2 91705759 to 91705768 9 - TSS region transcription start site region 25205
Cpgi11912 2 91710160 to 91711233 1073 CpG island CpG island 11912
Tssr25206 2 91710360 to 91710396 36 - TSS region transcription start site region 25206
Tssr25207 2 91710407 to 91710434 27 - TSS region transcription start site region 25207
Tssr25208 2 91710526 to 91710582 56 - TSS region transcription start site region 25208
Tssr25209 2 91710585 to 91710598 13 - TSS region transcription start site region 25209
Harbi1 2 91710852 to 91721545 10693 + protein coding gene harbinger transposase derived 1
Tssr18919 2 91710856 to 91710879 23 + TSS region transcription start site region 18919
Tssr18920 2 91710900 to 91710970 70 + TSS region transcription start site region 18920
Gm13776 2 91716159 to 91717419 1260 - pseudogene predicted gene 13776
Tssr25210 2 91717425 to 91717429 4 - TSS region transcription start site region 25210
Cpgi11913 2 91730035 to 91730868 833 CpG island CpG island 11913
Tssr18921 2 91730127 to 91730197 70 + TSS region transcription start site region 18921
Ambra1 2 91730134 to 91918849 188715 + protein coding gene autophagy/beclin 1 regulator 1
Tssr18922 2 91730933 to 91730938 5 + TSS region transcription start site region 18922
C130034I24Rik 2 91752010 to 91756080 4070 unclassified gene RIKEN cDNA C130034I24 gene
Tssr18923 2 91764657 to 91764662 5 + TSS region transcription start site region 18923
Tssr18924 2 91774311 to 91774319 8 + TSS region transcription start site region 18924
Tssr18925 2 91779865 to 91779869 4 + TSS region transcription start site region 18925
Tssr18926 2 91811631 to 91811655 24 + TSS region transcription start site region 18926
Tssr566 2 91877814 to 91877816 2 + TSS region transcription start site region 566
Tssr18927 2 91880539 to 91880543 4 + TSS region transcription start site region 18927
D2Mit334 2 91895691 to 91895788 97 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 334
Gm10805 2 91920528 to 91920928 400 - pseudogene predicted gene 10805
Cpgi11914 2 91921406 to 91924272 2866 CpG island CpG island 11914
Tssr18928 2 91922178 to 91922194 16 + TSS region transcription start site region 18928
Chrm4 2 91927249 to 91928688 1439 + protein coding gene cholinergic receptor, muscarinic 4
Cpgi11915 2 91927900 to 91928763 863 CpG island CpG island 11915
Tssr18929 2 91929672 to 91929676 4 + TSS region transcription start site region 18929
Mdk 2 91929805 to 91932297 2492 - protein coding gene midkine
Tssr25211 2 91929868 to 91929890 22 - TSS region transcription start site region 25211
Tssr25212 2 91929892 to 91929904 12 - TSS region transcription start site region 25212
Tssr25213 2 91930919 to 91930938 19 - TSS region transcription start site region 25213
Cpgi11916 2 91931054 to 91932185 1131 CpG island CpG island 11916
Tssr25214 2 91931451 to 91931534 83 - TSS region transcription start site region 25214
Tssr25215 2 91931661 to 91931670 9 - TSS region transcription start site region 25215
Tssr25216 2 91931675 to 91931686 11 - TSS region transcription start site region 25216
Tssr25217 2 91931696 to 91931723 27 - TSS region transcription start site region 25217
Tssr25218 2 91931728 to 91931772 44 - TSS region transcription start site region 25218
Tssr25219 2 91931774 to 91931793 19 - TSS region transcription start site region 25219
D2Mit1007 2 91931869 to 91931971 102 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 1007
Tssr25220 2 91931955 to 91931989 34 - TSS region transcription start site region 25220
D2Mit1008 2 91931964 to 91932132 168 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 1008
Tssr25221 2 91931994 to 91932008 14 - TSS region transcription start site region 25221
Gm39876 2 91932217 to 91932989 772 + lncRNA gene predicted gene, 39876
Dgkz 2 91932824 to 91975864 43040 - protein coding gene diacylglycerol kinase zeta
Tssr25222 2 91935794 to 91935821 27 - TSS region transcription start site region 25222
Tssr25223 2 91940297 to 91940336 39 - TSS region transcription start site region 25223
D2Mit45 2 91943041 to 91943158 117 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 45
D2Dcr50 2 91943071 to 91943203 132 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 50
Tssr25224 2 91944819 to 91944839 20 - TSS region transcription start site region 25224
Mir6999 2 91944870 to 91944930 60 - miRNA gene microRNA 6999
Gm9821 2 91945703 to 91947655 1952 + protein coding gene predicted gene 9821
Tssr25225 2 91947477 to 91947492 15 - TSS region transcription start site region 25225