MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:91044016-91069438

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rapsn	2	91035620 to 91045729	10109	+	protein coding gene	receptor-associated protein of the synapse
Gm13778	2	91044092 to 91053933	9841	-	unclassified non-coding RNA gene	predicted gene 13778
Tssr18820	2	91044940 to 91044967	27	+	TSS region	transcription start site region 18820
Cpgi11893	2	91053879 to 91054462	583		CpG island	CpG island 11893
Psmc3	2	91054016 to 91059438	5422	+	protein coding gene	proteasome (prosome, macropain) 26S subunit, ATPase 3
Tssr18821	2	91054025 to 91054038	13	+	TSS region	transcription start site region 18821
Tssr18822	2	91054054 to 91054114	60	+	TSS region	transcription start site region 18822
Tssr18823	2	91054119 to 91054132	13	+	TSS region	transcription start site region 18823
Tssr18824	2	91054136 to 91054141	5	+	TSS region	transcription start site region 18824
Tssr18825	2	91054144 to 91054175	31	+	TSS region	transcription start site region 18825
Tssr18826	2	91054179 to 91054198	19	+	TSS region	transcription start site region 18826
Tssr18827	2	91054207 to 91054239	32	+	TSS region	transcription start site region 18827
Tssr18828	2	91054263 to 91054303	40	+	TSS region	transcription start site region 18828
Tssr18829	2	91054584 to 91054604	20	+	TSS region	transcription start site region 18829
Slc39a13	2	91061781 to 91070330	8549	-	protein coding gene	solute carrier family 39 (metal ion transporter), member 13
Tssr25147	2	91063116 to 91063125	9	-	TSS region	transcription start site region 25147
Gm39875	2	91063827 to 91065288	1461	+	lncRNA gene	predicted gene, 39875