Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:90353173-90563189

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39869 2 90351519 to 90353649 2130 - lncRNA gene predicted gene, 39869
Gm13767 2 90354656 to 90372596 17940 - pseudogene predicted gene 13767
Tssr18751 2 90373182 to 90373211 29 + TSS region transcription start site region 18751
Tssr18752 2 90395121 to 90395159 38 + TSS region transcription start site region 18752
Tssr25079 2 90395171 to 90395192 21 - TSS region transcription start site region 25079
Olfr1274-ps 2 90400640 to 90401674 1034 + protein coding gene olfactory receptor 1274, pseudogene
Ptprj 2 90429754 to 90580647 150893 - protein coding gene protein tyrosine phosphatase, receptor type, J
Tssr25080 2 90439658 to 90439688 30 - TSS region transcription start site region 25080
Tssr25081 2 90450726 to 90450729 3 - TSS region transcription start site region 25081
Tssr25082 2 90450805 to 90450820 15 - TSS region transcription start site region 25082
Tssr25083 2 90451252 to 90451273 21 - TSS region transcription start site region 25083
Tssr25084 2 90453306 to 90453344 38 - TSS region transcription start site region 25084
Tssr25085 2 90457165 to 90457196 31 - TSS region transcription start site region 25085
Tssr25086 2 90457570 to 90457591 21 - TSS region transcription start site region 25086
Tssr25087 2 90458173 to 90458189 16 - TSS region transcription start site region 25087
Tssr25088 2 90458313 to 90458327 14 - TSS region transcription start site region 25088
Tssr18753 2 90459634 to 90459656 22 + TSS region transcription start site region 18753
Tssr25089 2 90460695 to 90460718 23 - TSS region transcription start site region 25089
Tssr25090 2 90460735 to 90460746 11 - TSS region transcription start site region 25090
Tssr25091 2 90460893 to 90460905 12 - TSS region transcription start site region 25091
Tssr25092 2 90463107 to 90463130 23 - TSS region transcription start site region 25092
Tssr25093 2 90466727 to 90466751 24 - TSS region transcription start site region 25093
Tssr25094 2 90471145 to 90471177 32 - TSS region transcription start site region 25094
Tssr25095 2 90471248 to 90471259 11 - TSS region transcription start site region 25095
Tssr25096 2 90479148 to 90479155 7 - TSS region transcription start site region 25096
Tssr25097 2 90479165 to 90479178 13 - TSS region transcription start site region 25097
Tssr18754 2 90479228 to 90479238 10 + TSS region transcription start site region 18754
4933423P22Rik 2 90479236 to 90488425 9189 + antisense lncRNA gene RIKEN cDNA 4933423P22 gene
Tssr18755 2 90487741 to 90487749 8 + TSS region transcription start site region 18755
Tssr25098 2 90490796 to 90490809 13 - TSS region transcription start site region 25098
Tssr25099 2 90491080 to 90491088 8 - TSS region transcription start site region 25099
Tssr25100 2 90505909 to 90505913 4 - TSS region transcription start site region 25100
D2Mit272 2 90515788 to 90515903 115 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 272
2310079F09Rik 2 90519432 to 90520641 1209 unclassified gene RIKEN cDNA 2310079F09 gene
Tssr25101 2 90523109 to 90523117 8 - TSS region transcription start site region 25101
Tssr25102 2 90525032 to 90525045 13 - TSS region transcription start site region 25102
Tssr25103 2 90528890 to 90528903 13 - TSS region transcription start site region 25103
A630073K07Rik 2 90538228 to 90540831 2603 unclassified gene RIKEN cDNA A630073K07 gene
Tssr25104 2 90540807 to 90540811 4 - TSS region transcription start site region 25104
Tssr25105 2 90542798 to 90542828 30 - TSS region transcription start site region 25105
Tssr25106 2 90546939 to 90546943 4 - TSS region transcription start site region 25106
9630014C11Rik 2 90548178 to 90549084 906 unclassified gene RIKEN cDNA 9630014C11 gene
Tssr25107 2 90548394 to 90548407 13 - TSS region transcription start site region 25107
Tssr25108 2 90549072 to 90549092 20 - TSS region transcription start site region 25108
Tssr25109 2 90550121 to 90550145 24 - TSS region transcription start site region 25109
Tssr25110 2 90556273 to 90556317 44 - TSS region transcription start site region 25110
Tssr25111 2 90556357 to 90556368 11 - TSS region transcription start site region 25111
Tssr25112 2 90563158 to 90563175 17 - TSS region transcription start site region 25112
Tssr25113 2 90563189 to 90563203 14 - TSS region transcription start site region 25113