Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:8956662-9326700

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30957 2 8946890 to 8975866 28976 + lncRNA gene predicted gene, 30957
Gm10854 2 9034200 to 9035203 1003 protein coding gene predicted gene 10854
Gm13217 2 9041124 to 9042484 1360 - pseudogene predicted gene 13217
Cpgi11181 2 9042537 to 9042688 151 CpG island CpG island 11181
Tssr22524 2 9141476 to 9141519 43 - TSS region transcription start site region 22524
Tssr16040 2 9141662 to 9141700 38 + TSS region transcription start site region 16040
Tssr22525 2 9175767 to 9175774 7 - TSS region transcription start site region 22525
Tssr22526 2 9176055 to 9176059 4 - TSS region transcription start site region 22526
Tssr22527 2 9176824 to 9176833 9 - TSS region transcription start site region 22527
Tssr22528 2 9176860 to 9176869 9 - TSS region transcription start site region 22528
Tssr22529 2 9177873 to 9177895 22 - TSS region transcription start site region 22529
Tssr16041 2 9178031 to 9178042 11 + TSS region transcription start site region 16041
Tssr22530 2 9178717 to 9178725 8 - TSS region transcription start site region 22530
Tssr16042 2 9187837 to 9187848 11 + TSS region transcription start site region 16042
1700061F12Rik 2 9189515 to 9197477 7962 + lincRNA gene RIKEN cDNA 1700061F12 gene
Tssr16043 2 9189546 to 9189557 11 + TSS region transcription start site region 16043
Tssr16044 2 9189558 to 9189563 5 + TSS region transcription start site region 16044
Tssr16045 2 9189567 to 9189574 7 + TSS region transcription start site region 16045
Tssr16046 2 9193478 to 9193505 27 + TSS region transcription start site region 16046
Gm23963 2 9240756 to 9240832 76 - miRNA gene predicted gene, 23963
Gm13221 2 9270080 to 9270509 429 - pseudogene predicted gene 13221
D2Dcr42 2 9271650 to 9271752 102 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 42
Tssr22531 2 9304860 to 9304863 3 - TSS region transcription start site region 22531
Tssr22532 2 9305047 to 9305052 5 - TSS region transcription start site region 22532
Tssr16047 2 9305327 to 9305332 5 + TSS region transcription start site region 16047
D2Dcr43 2 9308713 to 9308809 96 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 43
Tssr16048 2 9313363 to 9313366 3 + TSS region transcription start site region 16048