Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:85049144-85149185

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tnks1bp1 2 85048022 to 85073048 25026 + protein coding gene tankyrase 1 binding protein 1
Tssr18726 2 85050439 to 85050500 61 + TSS region transcription start site region 18726
Tssr18727 2 85060898 to 85060918 20 + TSS region transcription start site region 18727
Tssr18728 2 85060937 to 85060960 23 + TSS region transcription start site region 18728
Tssr18729 2 85060961 to 85060973 12 + TSS region transcription start site region 18729
4930443O20Rik 2 85073614 to 85086461 12847 - lncRNA gene RIKEN cDNA 4930443O20 gene
Tssr25064 2 85086456 to 85086464 8 - TSS region transcription start site region 25064
Tssr25065 2 85086469 to 85086498 29 - TSS region transcription start site region 25065
Tssr25066 2 85086511 to 85086516 5 - TSS region transcription start site region 25066
1700065F09Rik 2 85086619 to 85086979 360 unclassified gene RIKEN cDNA 1700065F09 gene
Tssr18730 2 85099144 to 85099185 41 + TSS region transcription start site region 18730
Tssr18731 2 85136343 to 85136354 11 + TSS region transcription start site region 18731
Tssr18732 2 85136355 to 85136371 16 + TSS region transcription start site region 18732
Aplnr 2 85136360 to 85139923 3563 + protein coding gene apelin receptor
Tssr18733 2 85136374 to 85136439 65 + TSS region transcription start site region 18733
Tssr18734 2 85136448 to 85136459 11 + TSS region transcription start site region 18734
Tssr18735 2 85136470 to 85136481 11 + TSS region transcription start site region 18735
Tssr18736 2 85136522 to 85136531 9 + TSS region transcription start site region 18736
Tssr18737 2 85136541 to 85136546 5 + TSS region transcription start site region 18737
Tssr18738 2 85136600 to 85136623 23 + TSS region transcription start site region 18738
Cpgi11879 2 85136696 to 85137421 725 CpG island CpG island 11879