Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:84842369-85032389

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc43a1 2 84838857 to 84863586 24729 + protein coding gene solute carrier family 43, member 1
Tssr18707 2 84851441 to 84851462 21 + TSS region transcription start site region 18707
Cpgi11871 2 84865737 to 84866687 950 CpG island CpG island 11871
Cpgi11872 2 84871460 to 84873030 1570 CpG island CpG island 11872
Rtn4rl2 2 84871924 to 84886710 14786 - protein coding gene reticulon 4 receptor-like 2
Cpgi11873 2 84882607 to 84882988 381 CpG island CpG island 11873
Cpgi11874 2 84886202 to 84888423 2221 CpG island CpG island 11874
Tssr25059 2 84886439 to 84886441 2 - TSS region transcription start site region 25059
Tssr25060 2 84887008 to 84887044 36 - TSS region transcription start site region 25060
Cpgi11875 2 84889070 to 84889439 369 CpG island CpG island 11875
Tssr18708 2 84916123 to 84916129 6 + TSS region transcription start site region 18708
Gm24332 2 84928074 to 84928175 101 + miRNA gene predicted gene, 24332
Slc43a3 2 84936579 to 84958509 21930 + protein coding gene solute carrier family 43, member 3
Tssr18709 2 84936583 to 84936606 23 + TSS region transcription start site region 18709
Tssr18710 2 84936611 to 84936712 101 + TSS region transcription start site region 18710
Cpgi11876 2 84936616 to 84936865 249 CpG island CpG island 11876
Tssr554 2 84937250 to 84937273 23 + TSS region transcription start site region 554
Tssr18711 2 84937369 to 84937389 20 + TSS region transcription start site region 18711
Tssr18712 2 84937614 to 84937634 20 + TSS region transcription start site region 18712
Tssr18713 2 84937652 to 84937678 26 + TSS region transcription start site region 18713
Tssr25061 2 84938416 to 84938428 12 - TSS region transcription start site region 25061
Tssr18714 2 84952580 to 84952583 3 + TSS region transcription start site region 18714
Tssr18715 2 84958862 to 84958865 3 + TSS region transcription start site region 18715
D2Mit160 2 84973819 to 84973948 129 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 160
Tssr18716 2 84980458 to 84980462 4 + TSS region transcription start site region 18716
Prg2 2 84980461 to 84983632 3171 + protein coding gene proteoglycan 2, bone marrow
Gm39868 2 84983713 to 84992095 8382 - lncRNA gene predicted gene, 39868
Tssr18717 2 84988194 to 84988197 3 + TSS region transcription start site region 18717
Prg3 2 84988215 to 84993886 5671 + protein coding gene proteoglycan 3
P2rx3 2 84998583 to 85037462 38879 - protein coding gene purinergic receptor P2X, ligand-gated ion channel, 3