Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:84496516-84706547

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr24996 2 84499524 to 84499570 46 - TSS region transcription start site region 24996
Gm13710 2 84500748 to 84506873 6125 - lincRNA gene predicted gene 13710
Tssr24997 2 84501301 to 84501332 31 - TSS region transcription start site region 24997
Tssr24998 2 84501404 to 84501417 13 - TSS region transcription start site region 24998
Tssr24999 2 84513645 to 84513662 17 - TSS region transcription start site region 24999
Tssr25000 2 84513687 to 84513695 8 - TSS region transcription start site region 25000
Tssr18666 2 84515551 to 84515590 39 + TSS region transcription start site region 18666
Tssr18667 2 84525471 to 84525475 4 + TSS region transcription start site region 18667
Tssr25001 2 84531316 to 84531331 15 - TSS region transcription start site region 25001
Tssr25002 2 84531346 to 84531357 11 - TSS region transcription start site region 25002
Tssr25003 2 84531360 to 84531389 29 - TSS region transcription start site region 25003
Tssr25004 2 84531426 to 84531437 11 - TSS region transcription start site region 25004
Tssr18668 2 84549933 to 84549945 12 + TSS region transcription start site region 18668
Ctnnd1 2 84600071 to 84650765 50694 - protein coding gene catenin (cadherin associated protein), delta 1
Gm28635 2 84601439 to 84678041 76602 - protein coding gene predicted gene 28635
Tssr25005 2 84601457 to 84601491 34 - TSS region transcription start site region 25005
Tssr25006 2 84601516 to 84601547 31 - TSS region transcription start site region 25006
Tssr25007 2 84635716 to 84635742 26 - TSS region transcription start site region 25007
Tssr25008 2 84637687 to 84637690 3 - TSS region transcription start site region 25008
AI225934 2 84641716 to 84643637 1921 unclassified gene expressed sequence AI225934
Tssr25009 2 84643615 to 84643621 6 - TSS region transcription start site region 25009
Tssr25010 2 84648553 to 84648564 11 - TSS region transcription start site region 25010
Tssr25011 2 84650469 to 84650487 18 - TSS region transcription start site region 25011
Tssr25012 2 84650490 to 84650544 54 - TSS region transcription start site region 25012
Tssr25013 2 84650549 to 84650580 31 - TSS region transcription start site region 25013
Tssr25014 2 84650679 to 84650687 8 - TSS region transcription start site region 25014
Tssr25015 2 84650698 to 84650709 11 - TSS region transcription start site region 25015
Tssr25016 2 84650714 to 84650749 35 - TSS region transcription start site region 25016
Tssr25017 2 84650760 to 84650771 11 - TSS region transcription start site region 25017
Tssr18669 2 84650901 to 84650945 44 + TSS region transcription start site region 18669
Cpgi11859 2 84658845 to 84659419 574 CpG island CpG island 11859
Tssr18670 2 84659065 to 84659082 17 + TSS region transcription start site region 18670
Btbd18 2 84659079 to 84668780 9701 + protein coding gene BTB (POZ) domain containing 18
Selenoh 2 84669215 to 84670708 1493 - protein coding gene selenoprotein H
Tssr18671 2 84670226 to 84670244 18 + TSS region transcription start site region 18671
Cpgi11860 2 84670241 to 84670983 742 CpG island CpG island 11860
Tssr25018 2 84670589 to 84670600 11 - TSS region transcription start site region 25018
Tssr25019 2 84670614 to 84670625 11 - TSS region transcription start site region 25019
Tssr25020 2 84670634 to 84670641 7 - TSS region transcription start site region 25020
Tssr25021 2 84670650 to 84670657 7 - TSS region transcription start site region 25021
Tssr25022 2 84670659 to 84670726 67 - TSS region transcription start site region 25022
Tssr25023 2 84670727 to 84670742 15 - TSS region transcription start site region 25023
Tmx2 2 84671311 to 84678828 7517 - protein coding gene thioredoxin-related transmembrane protein 2
Cpgi11861 2 84677720 to 84678793 1073 CpG island CpG island 11861
Tssr25024 2 84678051 to 84678083 32 - TSS region transcription start site region 25024
Tssr18672 2 84678396 to 84678450 54 + TSS region transcription start site region 18672
Med19 2 84678402 to 84688215 9813 + protein coding gene mediator complex subunit 19
Tssr18673 2 84678455 to 84678458 3 + TSS region transcription start site region 18673
Tssr18674 2 84678474 to 84678477 3 + TSS region transcription start site region 18674
Tssr18675 2 84678565 to 84678620 55 + TSS region transcription start site region 18675
Tssr25025 2 84678837 to 84678850 13 - TSS region transcription start site region 25025
Zdhhc5 2 84687970 to 84715180 27210 - protein coding gene zinc finger, DHHC domain containing 5
Tssr25026 2 84691994 to 84692017 23 - TSS region transcription start site region 25026
n-R5s200 2 84700748 to 84700860 112 - rRNA gene nuclear encoded rRNA 5S 200
Gm27942 2 84703262 to 84703362 100 + snRNA gene predicted gene, 27942