Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:82173511-83713663

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp804a 2 82053222 to 82259879 206657 + protein coding gene zinc finger protein 804A
D2Mit220 2 82186004 to 82186088 84 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 220
A130030D18Rik 2 82375372 to 82392202 16830 - lincRNA gene RIKEN cDNA A130030D18 gene
D2Mit331 2 82401883 to 82402136 253 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 331
Gm6497 2 82429079 to 82431419 2340 unclassified gene predicted gene 6497
Tssr18636 2 82507112 to 82507127 15 + TSS region transcription start site region 18636
Gm13675 2 82507216 to 82507744 528 + pseudogene predicted gene 13675
Tssr18637 2 82507649 to 82507666 17 + TSS region transcription start site region 18637
Gm13676 2 82543938 to 82544522 584 - pseudogene predicted gene 13676
Gm13678 2 82623213 to 82623552 339 + pseudogene predicted gene 13678
D2Ucl24 2 82818318 to 82818521 203 DNA segment DNA segment, Chr 2, University College London 24
D2Mit475 2 82821917 to 82822041 124 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 475
Cpgi11853 2 82943511 to 82943663 152 CpG island CpG island 11853
Tssr18638 2 82943627 to 82943640 13 + TSS region transcription start site region 18638
Fsip2 2 82943634 to 83008937 65303 + protein coding gene fibrous sheath-interacting protein 2
Tssr549 2 82991665 to 82991668 3 + TSS region transcription start site region 549
Gm28675 2 83100258 to 83126216 25958 - lincRNA gene predicted gene 28675
Tssr18639 2 83293199 to 83293200 1 + TSS region transcription start site region 18639
Gm13680 2 83353157 to 83353949 792 - pseudogene predicted gene 13680
Tssr24952 2 83353969 to 83353976 7 - TSS region transcription start site region 24952
Gm13679 2 83390129 to 83390612 483 + pseudogene predicted gene 13679
Gm13682 2 83394180 to 83394881 701 + pseudogene predicted gene 13682
Gm13681 2 83428702 to 83428911 209 + pseudogene predicted gene 13681
Gm13683 2 83451864 to 83458559 6695 + pseudogene predicted gene 13683
D2Mit419 2 83487518 to 83487635 117 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 419
Gm13685 2 83538535 to 83538675 140 - pseudogene predicted gene 13685
D2Mit461 2 83624920 to 83625066 146 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-461
Cpgi11854 2 83644112 to 83645269 1157 CpG island CpG island 11854
Tssr18640 2 83644477 to 83644490 13 + TSS region transcription start site region 18640
Tssr18641 2 83644501 to 83644521 20 + TSS region transcription start site region 18641
Tssr18642 2 83644524 to 83644547 23 + TSS region transcription start site region 18642
Tssr18643 2 83644564 to 83644577 13 + TSS region transcription start site region 18643
Zc3h15 2 83644578 to 83664617 20039 + protein coding gene zinc finger CCCH-type containing 15
Tssr18644 2 83644581 to 83644592 11 + TSS region transcription start site region 18644
Tssr18645 2 83659550 to 83659551 1 + TSS region transcription start site region 18645
Gm13686 2 83700657 to 83701116 459 - antisense lncRNA gene predicted gene 13686
Tssr18646 2 83706047 to 83706071 24 + TSS region transcription start site region 18646