Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:81908213-83338552

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi11852 2 82052782 to 82053881 1099 CpG island CpG island 11852
Tssr548 2 82053062 to 82053091 29 + TSS region transcription start site region 548
Zfp804a 2 82053222 to 82259879 206657 + protein coding gene zinc finger protein 804A
Tssr18633 2 82053290 to 82053311 21 + TSS region transcription start site region 18633
Tssr18634 2 82053378 to 82053391 13 + TSS region transcription start site region 18634
Tssr18635 2 82063885 to 82063888 3 + TSS region transcription start site region 18635
Gm13677 2 82122517 to 82123111 594 - pseudogene predicted gene 13677
D2Mit220 2 82186004 to 82186088 84 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 220
A130030D18Rik 2 82375372 to 82392202 16830 - lincRNA gene RIKEN cDNA A130030D18 gene
D2Mit331 2 82401883 to 82402136 253 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 331
Gm6497 2 82429079 to 82431419 2340 unclassified gene predicted gene 6497
Tssr18636 2 82507112 to 82507127 15 + TSS region transcription start site region 18636
Gm13675 2 82507216 to 82507744 528 + pseudogene predicted gene 13675
Tssr18637 2 82507649 to 82507666 17 + TSS region transcription start site region 18637
Gm13676 2 82543938 to 82544522 584 - pseudogene predicted gene 13676
Gm13678 2 82623213 to 82623552 339 + pseudogene predicted gene 13678
D2Ucl24 2 82818318 to 82818521 203 DNA segment DNA segment, Chr 2, University College London 24
D2Mit475 2 82821917 to 82822041 124 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 475
Cpgi11853 2 82943511 to 82943663 152 CpG island CpG island 11853
Tssr18638 2 82943627 to 82943640 13 + TSS region transcription start site region 18638
Fsip2 2 82943634 to 83008937 65303 + protein coding gene fibrous sheath-interacting protein 2
Tssr549 2 82991665 to 82991668 3 + TSS region transcription start site region 549
Gm28675 2 83100258 to 83126216 25958 - lincRNA gene predicted gene 28675
Tssr18639 2 83293199 to 83293200 1 + TSS region transcription start site region 18639