Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:80614083-81354189

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr18621 2 80617185 to 80617290 105 + TSS region transcription start site region 18621
Dusp19 2 80617214 to 80631661 14447 + protein coding gene dual specificity phosphatase 19
Tssr18622 2 80617347 to 80617354 7 + TSS region transcription start site region 18622
Mir684-1 2 80628705 to 80628790 85 - miRNA gene microRNA 684-1
Gm13690 2 80629284 to 80629568 284 - pseudogene predicted gene 13690
Tssr18623 2 80631747 to 80631755 8 + TSS region transcription start site region 18623
2210011G09Rik 2 80633737 to 80634464 727 unclassified gene RIKEN cDNA 2210011G09 gene
Tssr18624 2 80635226 to 80635237 11 + TSS region transcription start site region 18624
Tssr18625 2 80635243 to 80635250 7 + TSS region transcription start site region 18625
Tssr18626 2 80635252 to 80635269 17 + TSS region transcription start site region 18626
Tssr18627 2 80635275 to 80635282 7 + TSS region transcription start site region 18627
Cpgi11851 2 80638712 to 80639262 550 CpG island CpG island 11851
Tssr18628 2 80638798 to 80638834 36 + TSS region transcription start site region 18628
Nup35 2 80638812 to 80660071 21259 + protein coding gene nucleoporin 35
Tssr18629 2 80638844 to 80638856 12 + TSS region transcription start site region 18629
Tssr18630 2 80643980 to 80643989 9 + TSS region transcription start site region 18630
Gm36282 2 80699766 to 80727997 28231 + lncRNA gene predicted gene, 36282
Gm25420 2 80707589 to 80707715 126 + snoRNA gene predicted gene, 25420
Tssr24951 2 80717990 to 80717996 6 - TSS region transcription start site region 24951
Hsl1 2 80739810 to 80739957 147 QTL hyperoxia susceptibility locus 1
D2Mit248 2 80739810 to 80739957 147 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 248
Tssr18631 2 80837083 to 80837094 11 + TSS region transcription start site region 18631
Gm4735 2 80837141 to 80838442 1301 + pseudogene predicted gene 4735
Gm22652 2 80850288 to 80850418 130 + snoRNA gene predicted gene, 22652
Gm13700 2 80861155 to 80862282 1127 - pseudogene predicted gene 13700
Gm13755 2 80890106 to 80894441 4335 + pseudogene predicted gene 13755
Gm13756 2 80908741 to 80909355 614 - pseudogene predicted gene 13756
D2Ucl8 2 80914069 to 80914341 272 DNA segment DNA segment, Chr 2, University College London 8
Gm23452 2 80984083 to 80984189 106 - snRNA gene predicted gene, 23452
Tssr547 2 81087325 to 81087329 4 + TSS region transcription start site region 547