Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:80294897-80500525

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prdx6b 2 80292472 to 80295356 2884 + protein coding gene peroxiredoxin 6B
Tssr24928 2 80300960 to 80300967 7 - TSS region transcription start site region 24928
Tssr18601 2 80302255 to 80302258 3 + TSS region transcription start site region 18601
Tssr18602 2 80302311 to 80302318 7 + TSS region transcription start site region 18602
Tssr18603 2 80302328 to 80302331 3 + TSS region transcription start site region 18603
Tssr18604 2 80302344 to 80302355 11 + TSS region transcription start site region 18604
Tssr18605 2 80302359 to 80302364 5 + TSS region transcription start site region 18605
Tssr24929 2 80304611 to 80304626 15 - TSS region transcription start site region 24929
Gm18693 2 80305857 to 80306609 752 - pseudogene predicted gene, 18693
Cpgi11848 2 80315382 to 80316166 784 CpG island CpG island 11848
Tssr18606 2 80315461 to 80315511 50 + TSS region transcription start site region 18606
Dnajc10 2 80315466 to 80354043 38577 + protein coding gene DnaJ heat shock protein family (Hsp40) member C10
Tssr18607 2 80315516 to 80315528 12 + TSS region transcription start site region 18607
Tssr18608 2 80315535 to 80315546 11 + TSS region transcription start site region 18608
Tssr18609 2 80315669 to 80315678 9 + TSS region transcription start site region 18609
Tssr18610 2 80315703 to 80315744 41 + TSS region transcription start site region 18610
Tssr18611 2 80316756 to 80316768 12 + TSS region transcription start site region 18611
Tssr18612 2 80316827 to 80316841 14 + TSS region transcription start site region 18612
Tssr18613 2 80316843 to 80316873 30 + TSS region transcription start site region 18613
Tssr18614 2 80316879 to 80316880 1 + TSS region transcription start site region 18614
Tssr546 2 80316966 to 80316983 17 + TSS region transcription start site region 546
Tssr18615 2 80316988 to 80316994 6 + TSS region transcription start site region 18615
Tssr18616 2 80317004 to 80317024 20 + TSS region transcription start site region 18616
Tssr18617 2 80317354 to 80317363 9 + TSS region transcription start site region 18617
Tssr18618 2 80318016 to 80318024 8 + TSS region transcription start site region 18618
Tssr18619 2 80318030 to 80318041 11 + TSS region transcription start site region 18619
Tssr18620 2 80324384 to 80324388 4 + TSS region transcription start site region 18620
Gm13752 2 80394897 to 80400525 5628 + antisense lncRNA gene predicted gene 13752
Frzb 2 80411970 to 80447396 35426 - protein coding gene frizzled-related protein
Tssr24930 2 80438641 to 80438644 3 - TSS region transcription start site region 24930
Cpgi11849 2 80446101 to 80447838 1737 CpG island CpG island 11849
Tssr24931 2 80447058 to 80447072 14 - TSS region transcription start site region 24931
Tssr24932 2 80447087 to 80447090 3 - TSS region transcription start site region 24932
Tssr24933 2 80447238 to 80447245 7 - TSS region transcription start site region 24933
Tssr24934 2 80447247 to 80447266 19 - TSS region transcription start site region 24934
Tssr24935 2 80447359 to 80447376 17 - TSS region transcription start site region 24935
Tssr24936 2 80447386 to 80447406 20 - TSS region transcription start site region 24936
Tssr24937 2 80447407 to 80447425 18 - TSS region transcription start site region 24937
Gm13687 2 80499230 to 80499511 281 + pseudogene predicted gene 13687
Tssr24938 2 80499813 to 80499817 4 - TSS region transcription start site region 24938
Nckap1 2 80500512 to 80581299 80787 - protein coding gene NCK-associated protein 1