Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:79454771-79647400

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Neurod1 2 79452641 to 79456636 3995 - protein coding gene neurogenic differentiation 1
Cpgi11842 2 79453894 to 79454895 1001 CpG island CpG island 11842
Gm26755 2 79453985 to 79461107 7122 + lincRNA gene predicted gene, 26755
Tssr24899 2 79454950 to 79454962 12 - TSS region transcription start site region 24899
Tssr24900 2 79454965 to 79454972 7 - TSS region transcription start site region 24900
Tssr24901 2 79454986 to 79454992 6 - TSS region transcription start site region 24901
Tssr24902 2 79455021 to 79455031 10 - TSS region transcription start site region 24902
Tssr24903 2 79455072 to 79455089 17 - TSS region transcription start site region 24903
Tssr24904 2 79456301 to 79456304 3 - TSS region transcription start site region 24904
Cpgi11843 2 79456555 to 79457021 466 CpG island CpG island 11843
Tssr24905 2 79456626 to 79456644 18 - TSS region transcription start site region 24905
Tssr24906 2 79456750 to 79456761 11 - TSS region transcription start site region 24906
Cpgi11844 2 79458830 to 79459435 605 CpG island CpG island 11844
Gm39867 2 79549771 to 79552400 2629 + lncRNA gene predicted gene, 39867
Tssr18580 2 79587751 to 79587771 20 + TSS region transcription start site region 18580
Tssr18581 2 79587792 to 79587799 7 + TSS region transcription start site region 18581
Tssr18582 2 79606295 to 79606302 7 + TSS region transcription start site region 18582
Tssr18583 2 79621605 to 79621635 30 + TSS region transcription start site region 18583
Gm46751 2 79629719 to 79635158 5439 - lncRNA gene predicted gene, 46751
Cpgi11845 2 79634923 to 79636267 1344 CpG island CpG island 11845
Tssr18584 2 79635270 to 79635290 20 + TSS region transcription start site region 18584
Tssr18585 2 79635300 to 79635320 20 + TSS region transcription start site region 18585
Itprid2 2 79635352 to 79672966 37614 + protein coding gene ITPR interacting domain containing 2
Tssr18586 2 79635370 to 79635410 40 + TSS region transcription start site region 18586
Tssr18587 2 79635416 to 79635441 25 + TSS region transcription start site region 18587
Tssr18588 2 79635444 to 79635463 19 + TSS region transcription start site region 18588
Tssr18589 2 79635599 to 79635650 51 + TSS region transcription start site region 18589
Tssr18590 2 79635654 to 79635671 17 + TSS region transcription start site region 18590
Tssr18591 2 79639194 to 79639207 13 + TSS region transcription start site region 18591
Tssr18592 2 79644526 to 79644551 25 + TSS region transcription start site region 18592