Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:79365599-79905650

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cerkl 2 79331216 to 79449223 118007 - protein coding gene ceramide kinase-like
Tssr24884 2 79368858 to 79368868 10 - TSS region transcription start site region 24884
Tssr24885 2 79369070 to 79369090 20 - TSS region transcription start site region 24885
Tssr24886 2 79369103 to 79369127 24 - TSS region transcription start site region 24886
Tssr24887 2 79370855 to 79370892 37 - TSS region transcription start site region 24887
Tssr24888 2 79391558 to 79391561 3 - TSS region transcription start site region 24888
Tssr24889 2 79409600 to 79409602 2 - TSS region transcription start site region 24889
Cpgi11841 2 79428517 to 79429032 515 CpG island CpG island 11841
Tssr24890 2 79428958 to 79428990 32 - TSS region transcription start site region 24890
Tssr24891 2 79451923 to 79451962 39 - TSS region transcription start site region 24891
Neurod1 2 79452641 to 79456636 3995 - protein coding gene neurogenic differentiation 1
Tssr24892 2 79453207 to 79453217 10 - TSS region transcription start site region 24892
Cpgi11842 2 79453894 to 79454895 1001 CpG island CpG island 11842
Tssr24893 2 79453916 to 79453960 44 - TSS region transcription start site region 24893
Gm26755 2 79453985 to 79461107 7122 + lincRNA gene predicted gene, 26755
Tssr24894 2 79454253 to 79454275 22 - TSS region transcription start site region 24894
Tssr24895 2 79454307 to 79454316 9 - TSS region transcription start site region 24895
Tssr24896 2 79454385 to 79454392 7 - TSS region transcription start site region 24896
Tssr24897 2 79454649 to 79454674 25 - TSS region transcription start site region 24897
Tssr24898 2 79454699 to 79454710 11 - TSS region transcription start site region 24898
Tssr24899 2 79454950 to 79454962 12 - TSS region transcription start site region 24899
Tssr24900 2 79454965 to 79454972 7 - TSS region transcription start site region 24900
Tssr24901 2 79454986 to 79454992 6 - TSS region transcription start site region 24901
Tssr24902 2 79455021 to 79455031 10 - TSS region transcription start site region 24902
Tssr24903 2 79455072 to 79455089 17 - TSS region transcription start site region 24903
Tssr24904 2 79456301 to 79456304 3 - TSS region transcription start site region 24904
Cpgi11843 2 79456555 to 79457021 466 CpG island CpG island 11843
Tssr24905 2 79456626 to 79456644 18 - TSS region transcription start site region 24905
Tssr24906 2 79456750 to 79456761 11 - TSS region transcription start site region 24906
Cpgi11844 2 79458830 to 79459435 605 CpG island CpG island 11844
Gm39867 2 79549771 to 79552400 2629 + lncRNA gene predicted gene, 39867
Tssr18580 2 79587751 to 79587771 20 + TSS region transcription start site region 18580
Tssr18581 2 79587792 to 79587799 7 + TSS region transcription start site region 18581
Tssr18582 2 79606295 to 79606302 7 + TSS region transcription start site region 18582
Tssr18583 2 79621605 to 79621635 30 + TSS region transcription start site region 18583
Gm46751 2 79629719 to 79635158 5439 - lncRNA gene predicted gene, 46751
Cpgi11845 2 79634923 to 79636267 1344 CpG island CpG island 11845
Tssr18584 2 79635270 to 79635290 20 + TSS region transcription start site region 18584
Tssr18585 2 79635300 to 79635320 20 + TSS region transcription start site region 18585
Itprid2 2 79635352 to 79672966 37614 + protein coding gene ITPR interacting domain containing 2
Tssr18586 2 79635370 to 79635410 40 + TSS region transcription start site region 18586
Tssr18587 2 79635416 to 79635441 25 + TSS region transcription start site region 18587
Tssr18588 2 79635444 to 79635463 19 + TSS region transcription start site region 18588
Tssr18589 2 79635599 to 79635650 51 + TSS region transcription start site region 18589
Tssr18590 2 79635654 to 79635671 17 + TSS region transcription start site region 18590
Tssr18591 2 79639194 to 79639207 13 + TSS region transcription start site region 18591
Tssr18592 2 79644526 to 79644551 25 + TSS region transcription start site region 18592
Tssr18593 2 79652001 to 79652024 23 + TSS region transcription start site region 18593
Cpgi11846 2 79696032 to 79696208 176 CpG island CpG island 11846
Ppp1r1c 2 79707780 to 79818496 110716 + protein coding gene protein phosphatase 1, regulatory inhibitor subunit 1C
Tssr18594 2 79707916 to 79707927 11 + TSS region transcription start site region 18594
Tssr18595 2 79786560 to 79786569 9 + TSS region transcription start site region 18595
Tssr18596 2 79786597 to 79786609 12 + TSS region transcription start site region 18596
Pde1a 2 79834453 to 80129458 295005 - protein coding gene phosphodiesterase 1A, calmodulin-dependent