Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:78137698-78888336

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930440I19Rik 2 78051177 to 78194430 143253 + lincRNA gene RIKEN cDNA 4930440I19 gene
Tssr18514 2 78214787 to 78214792 5 + TSS region transcription start site region 18514
D2Ucl6 2 78235111 to 78235309 198 DNA segment DNA segment, Chr 2, University College London 6
Gm14461 2 78237547 to 78302230 64683 + lincRNA gene predicted gene 14461
Gm39864 2 78266034 to 78272039 6005 + lncRNA gene predicted gene, 39864
Tssr18515 2 78293160 to 78293311 151 + TSS region transcription start site region 18515
Tssr18516 2 78304683 to 78304691 8 + TSS region transcription start site region 18516
Tssr18517 2 78357624 to 78357630 6 + TSS region transcription start site region 18517
Tssr18518 2 78369986 to 78369990 4 + TSS region transcription start site region 18518
Gm46750 2 78387873 to 78421131 33258 + lncRNA gene predicted gene, 46750
Gm14460 2 78512698 to 78513336 638 - pseudogene predicted gene 14460
D2Mit159 2 78516768 to 78516883 115 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 159
Gm23149 2 78550508 to 78550737 229 - unclassified non-coding RNA gene predicted gene, 23149
Gm14464 2 78597669 to 78598922 1253 + pseudogene predicted gene 14464
Gm14463 2 78657429 to 78657926 497 + pseudogene predicted gene 14463
Tssr18519 2 78709501 to 78709508 7 + TSS region transcription start site region 18519
Gm39865 2 78750919 to 78828785 77866 + lncRNA gene predicted gene, 39865
Gm17014 2 78845286 to 78845453 167 - pseudogene predicted gene 17014
Tssr18520 2 78845469 to 78845498 29 + TSS region transcription start site region 18520
4930401B11Rik 2 78845491 to 78846581 1090 unclassified gene RIKEN cDNA 4930401B11 gene
Ube2e3 2 78868243 to 78921288 53045 + protein coding gene ubiquitin-conjugating enzyme E2E 3
Cpgi11839 2 78868341 to 78869955 1614 CpG island CpG island 11839
Tssr18521 2 78868725 to 78868756 31 + TSS region transcription start site region 18521
Tssr18522 2 78868795 to 78868808 13 + TSS region transcription start site region 18522
Tssr18523 2 78869009 to 78869109 100 + TSS region transcription start site region 18523
Tssr18524 2 78869120 to 78869142 22 + TSS region transcription start site region 18524
Tssr18525 2 78869152 to 78869163 11 + TSS region transcription start site region 18525
Tssr18526 2 78869201 to 78869262 61 + TSS region transcription start site region 18526
Tssr18527 2 78869298 to 78869321 23 + TSS region transcription start site region 18527
Tssr18528 2 78869345 to 78869376 31 + TSS region transcription start site region 18528
Tssr18529 2 78869482 to 78869511 29 + TSS region transcription start site region 18529
Tssr18530 2 78872400 to 78872419 19 + TSS region transcription start site region 18530
Tssr18531 2 78884300 to 78884304 4 + TSS region transcription start site region 18531